Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g030440 Medicago truncatula HOM05D001936 ORTHO05D264370 5.6e-44 180.6 97 100.0
Medtr1g114250 Medicago truncatula HOM05D001936 ORTHO05D002296 1.3e-19 99.8 141 51.1
Psat6g233280 Pisum sativum HOM05D001936 ORTHO05D002296 1.6e-19 99.4 141 51.1
Glyma.16G077300 Glycine max HOM05D001936 ORTHO05D002296 3.1e-18 95.1 141 48.9
TPR.G4144 Trifolium pratense HOM05D001936 ORTHO05D002296 1.2e-17 93.2 143 49.0
Ca_11223_v3 Cicer arietinum L. HOM05D001936 ORTHO05D002296 1.0e-16 90.1 141 48.9
arahy.Tifrunner.gnm1.ann1.CN6NPZ Arachis hypogaea HOM05D001936 ORTHO05D002296 4.2e-15 84.7 141 43.3
Lalb_Chr14g0371791 Lupinus albus HOM05D001936 ORTHO05D002296 9.3e-15 83.6 141 45.4
Lalb_Chr24g0397351 Lupinus albus HOM05D001936 ORTHO05D002296 3.5e-14 81.6 140 46.4
arahy.Tifrunner.gnm1.ann1.392IT2 Arachis hypogaea HOM05D001936 ORTHO05D002296 4.6e-14 81.3 141 43.3
Lj2g0012154 Lotus japonicus HOM05D001936 ORTHO05D002296 1.8e-13 79.3 141 45.4
Glyma.01G009300 Glycine max HOM05D001936 ORTHO05D002296 5.1e-13 77.8 141 44.7
Phvul.004G170000 Phaseolus vulgaris HOM05D001936 ORTHO05D002296 6.7e-13 77.4 139 43.9
VMungo0464G0978 Vigna mungo HOM05D001936 ORTHO05D002296 1.3e-11 73.2 139 43.9
QL02p042183 Quercus lobata HOM05D001936 ORTHO05D002296 1.1e-10 70.1 142 40.1
GSVIVG01015322001 Vitis vinifera HOM05D001936 ORTHO05D002296 1.4e-10 69.7 142 40.8
Dinv36701 Davidia involucrata HOM05D001936 ORTHO05D002296 3.1e-10 68.6 142 40.1
Dinv41658 Davidia involucrata HOM05D001936 ORTHO05D002296 3.1e-10 68.6 138 41.3
MD02G1060500 Malus domestica HOM05D001936 ORTHO05D002296 3.1e-10 68.6 142 40.8
MD15G1194000 Malus domestica HOM05D001936 ORTHO05D002296 3.1e-10 68.6 144 38.9
CANSAT56G4264 Cannabis sativa HOM05D001936 ORTHO05D002296 2.6e-09 65.5 145 39.3
Duzib168G2362 Durio zibethinus HOM05D001936 ORTHO05D002296 2.6e-09 65.5 143 39.2
Prupe.7G222300 Prunus persica HOM05D001936 ORTHO05D002296 2.6e-09 65.5 142 38.7
TAR624G1374 Trochodendron aralioides HOM05D001936 ORTHO05D002296 2.6e-09 65.5 148 38.5
Cpa.g.sc40.47 Carica papaya HOM05D001936 ORTHO05D002296 3.4e-09 65.1 141 36.9
Sed0026136 Sechium edule HOM05D001936 ORTHO05D002296 3.4e-09 65.1 141 39.0
Cfa003201 Carpinus fangiana HOM05D001936 ORTHO05D002296 5.9e-09 64.3 142 40.1
DCAR_028666 Daucus carota HOM05D001936 ORTHO05D002296 5.9e-09 64.3 147 38.1
Hma1.2p1_0945F.1_g240290 Hydrangea macrophylla HOM05D001936 ORTHO05D002296 7.6e-09 63.9 142 38.0
CiPaw.03G226600 Carya illinoinensis HOM05D001936 ORTHO05D002296 1.0e-08 63.5 144 38.2
TAR383G0172 Trochodendron aralioides HOM05D001936 ORTHO05D002296 1.0e-08 63.5 148 35.8
Aqoxy7G01478 Aquilegia oxysepala HOM05D001936 ORTHO05D002296 1.3e-08 63.2 148 37.8
ClCG06G009030 Citrullus lanatus HOM05D001936 ORTHO05D002296 1.3e-08 63.2 141 38.3
Nn2g11619 Nelumbo nucifera HOM05D001936 ORTHO05D002296 1.3e-08 63.2 147 36.1
SalBow5G5474 Salvia bowleyana HOM05D001936 ORTHO05D002296 1.7e-08 62.8 145 37.2
Nn8g39124 Nelumbo nucifera HOM05D001936 ORTHO05D002296 2.2e-08 62.4 148 35.1
RcHm_v2.0_Chr2g0091521 Rosa chinensis HOM05D001936 ORTHO05D002296 2.2e-08 62.4 142 36.6
Duzib187G1737 Durio zibethinus HOM05D001936 ORTHO05D002296 3.8e-08 61.6 142 38.7
Oeu053162.2 Olea europaea HOM05D001936 ORTHO05D002296 3.8e-08 61.6 139 37.4
Atru.chr7.1438 Acer truncatum HOM05D001936 ORTHO05D002296 5.0e-08 61.2 147 36.1
CsaV3_1G024100 Cucumis sativus L. HOM05D001936 ORTHO05D002296 5.0e-08 61.2 140 38.6
COL.COLO4_34777 Corchorus olitorius HOM05D001936 ORTHO05D002296 6.5e-08 60.8 146 37.7
Haze_25806 Corylus avellana HOM05D001936 ORTHO05D002296 6.5e-08 60.8 142 38.7
FvH4_1g05850 Fragaria vesca HOM05D001936 ORTHO05D002296 6.5e-08 60.8 142 35.9
FAN19G1858 Fragaria x ananassa HOM05D001936 ORTHO05D002296 6.5e-08 60.8 142 35.9
FAN23G2074 Fragaria x ananassa HOM05D001936 ORTHO05D002296 6.5e-08 60.8 142 35.9
FAN28G1484 Fragaria x ananassa HOM05D001936 ORTHO05D002296 6.5e-08 60.8 142 35.9
FAN26G1817 Fragaria x ananassa HOM05D001936 ORTHO05D002296 1.1e-07 60.1 142 35.9
FAN26G3424 Fragaria x ananassa HOM05D001936 ORTHO05D002296 1.1e-07 60.1 142 35.9
RcHm_v2.0_Chr2g0091601 Rosa chinensis HOM05D001936 ORTHO05D002296 1.1e-07 60.1 143 35.7
Hund26250 Selenicereus undatus HOM05D001936 ORTHO05D002296 1.1e-07 60.1 152 36.2
ATR0705G071 Amborella trichopoda HOM05D001936 ORTHO05D002296 1.4e-07 59.7 146 37.7
MBI01_g18388_MAGBIO Magnolia biondii HOM05D001936 ORTHO05D002296 1.4e-07 59.7 148 35.8
Carub.0006s1804 Capsella rubella HOM05D001936 ORTHO05D002296 2.5e-07 58.9 140 37.1
MELO3C024710.2 Cucumis melo HOM05D001936 ORTHO05D002296 3.2e-07 58.5 140 39.3
PSO173G0028 Papaver somniferum HOM05D001936 ORTHO05D002296 3.2e-07 58.5 145 36.6
PSO824G0041 Papaver somniferum HOM05D001936 ORTHO05D002296 3.2e-07 58.5 145 36.6
BcaB01g04835 Brassica carinata HOM05D001936 ORTHO05D002296 5.5e-07 57.8 142 39.4
A03p09580 Brassica napus HOM05D001936 ORTHO05D002296 5.5e-07 57.8 142 39.4
BolC3t13585H Brassica oleracea HOM05D001936 ORTHO05D002296 5.5e-07 57.8 142 39.4
BraA03t10275Z Brassica rapa HOM05D001936 ORTHO05D002296 5.5e-07 57.8 142 39.4
Gohir.A06G066300 Gossypium hirsutum HOM05D001936 ORTHO05D002296 5.5e-07 57.8 143 36.4
Gohir.D06G064800 Gossypium hirsutum HOM05D001936 ORTHO05D002296 5.5e-07 57.8 143 36.4
Thecc.09G102900 Theobroma cacao HOM05D001936 ORTHO05D002296 7.2e-07 57.4 143 37.1
Lsat_1_v5_gn_5_143841 Lactuca sativa HOM05D001936 ORTHO05D002296 9.3e-07 57.0 138 36.2
BcaC03g13700 Brassica carinata HOM05D001936 ORTHO05D002296 1.6e-06 56.2 142 37.3
Gorai.010G075800 Gossypium raimondii HOM05D001936 ORTHO05D002296 1.6e-06 56.2 143 35.7
Sed0021039 Sechium edule HOM05D001936 ORTHO05D002296 2.1e-06 55.8 142 35.9
AL6G31200 Arabidopsis lyrata HOM05D001936 ORTHO05D002296 2.7e-06 55.5 143 36.4
CARHR193220 Cardamine hirsuta HOM05D001936 ORTHO05D002296 3.6e-06 55.1 143 36.4
AT5G19690 Arabidopsis thaliana HOM05D001936 ORTHO05D002296 6.1e-06 54.3 143 35.7
BNapus_Darmor_BZH_scaffold_38p02210 Brassica napus HOM05D001936 ORTHO05D002296 6.1e-06 54.3 141 36.2
DCAR_024701 Daucus carota HOM05D001936 ORTHO05D002296 6.1e-06 54.3 146 35.6
Peaxi162Scf00665g00214 Petunia axillaris HOM05D001936 ORTHO05D002296 6.1e-06 54.3 135 34.1
C03p11150 Brassica napus HOM05D001936 ORTHO05D002296 7.9e-06 53.9 142 38.7


User provided reference genes

Program Settings