Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 1.1e-67 260.0 144 100.0
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 5.8e-29 131.3 133 65.4
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 2.4e-27 125.9 141 61.7
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.8e-23 112.5 101 69.3
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.2e-20 102.8 135 49.6
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 5.4e-19 98.2 119 52.9
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 2.3e-17 92.8 122 50.8
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.5e-16 89.4 135 51.9
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 6.2e-15 84.7 127 44.1
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.1e-14 84.0 114 45.6
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.1e-14 84.0 123 43.1
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.8e-14 83.2 129 44.2
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.0e-13 79.7 142 40.8
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.6e-13 79.3 137 52.6
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 5.8e-13 78.2 141 36.9
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.3e-12 77.0 147 38.8
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.9e-12 75.9 153 36.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 6.4e-12 74.7 140 38.6
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.4e-11 73.6 133 36.1
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.2e-11 72.4 112 35.7
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 7.1e-11 71.2 135 37.0
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.6e-10 70.1 147 44.2
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.6e-10 70.1 120 39.2
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.6e-10 70.1 127 39.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.1e-10 69.7 127 38.6
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 2.7e-10 69.3 149 43.6
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.7e-10 69.3 145 34.5
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 6.0e-10 68.2 137 37.2
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 6.0e-10 68.2 122 34.4
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.0e-09 67.4 99 35.4
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.0e-09 67.4 137 44.5
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.3e-09 67.0 130 33.8
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.3e-09 67.0 122 37.7
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.8e-09 66.6 124 35.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.3e-09 66.2 107 38.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.0e-09 65.9 112 38.4
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 6.7e-09 64.7 122 41.0
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.7e-09 64.7 105 40.0
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 8.7e-09 64.3 135 45.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.5e-08 63.5 125 37.6
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.5e-08 63.5 116 40.5
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.5e-08 62.8 123 40.7
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.5e-08 62.8 103 39.8
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 5.6e-08 61.6 102 38.2
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.6e-08 61.6 141 37.6
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.6e-08 60.8 115 37.4
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.6e-07 60.1 141 36.9
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.1e-07 59.7 113 31.9
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.1e-07 59.7 106 41.5
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 2.1e-07 59.7 133 32.3
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.8e-07 59.3 111 38.7
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 2.8e-07 59.3 122 42.6
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.7e-07 58.9 137 35.8
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.8e-07 58.5 116 32.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.2e-07 58.2 121 45.5
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 8.1e-07 57.8 141 39.0
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 2.4e-06 56.2 126 34.1
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.4e-06 56.2 130 32.3
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 3.1e-06 55.8 120 35.8
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 3.1e-06 55.8 136 33.1
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.0e-06 55.5 136 33.1
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.0e-06 55.5 135 31.1
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 5.3e-06 55.1 140 37.9
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 5.3e-06 55.1 134 35.1
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 5.3e-06 55.1 134 35.1
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 5.3e-06 55.1 134 35.1
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.3e-06 55.1 131 29.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.3e-06 55.1 127 40.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.3e-06 55.1 108 36.1
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.9e-06 54.7 122 41.0
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 6.9e-06 54.7 127 34.6
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 6.9e-06 54.7 133 36.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 6.9e-06 54.7 131 35.1
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 9.0e-06 54.3 127 31.5
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 9.0e-06 54.3 127 37.0
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 9.0e-06 54.3 130 31.5


User provided reference genes

Program Settings