Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 1.2e-178 629.8 330 100.0
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 1.3e-119 433.7 349 73.6
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 1.1e-102 377.5 357 65.0
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 1.0e-100 370.9 343 63.3
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 2.1e-98 363.2 333 66.1
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 3.7e-95 352.4 366 59.0
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 4.8e-95 352.1 344 63.1
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 4.8e-95 352.1 344 63.1
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 1.3e-92 344.0 371 58.0
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 1.6e-90 337.0 351 58.4
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 1.9e-83 313.5 374 55.3
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 2.0e-77 293.5 382 51.8
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 2.9e-76 289.7 381 51.7
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 2.6e-48 196.8 386 40.2
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 3.0e-41 173.3 403 37.2
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 3.0e-41 173.3 364 41.2
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 4.1e-38 162.9 382 36.1
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 1.2e-32 144.8 402 32.3
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 1.5e-32 144.4 343 35.9
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 4.4e-32 142.9 393 34.6
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 2.0e-29 134.0 340 32.6
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 7.3e-27 125.6 340 34.7
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.8e-25 120.9 365 31.8
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 3.4e-24 116.7 362 32.6
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 2.3e-20 104.0 363 28.4
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 9.5e-19 98.6 321 33.0
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 6.2e-18 95.9 402 29.1
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 5.2e-17 92.8 431 29.5
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 4.3e-11 73.2 356 26.1
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 2.1e-10 70.9 345 27.5
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 1.4e-09 68.2 99 39.4
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 2.4e-09 67.4 102 41.2


User provided reference genes

Program Settings