Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-107 393.3 189 100.0
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-37 159.1 154 53.9
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 2.3e-33 146.4 155 51.0
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-29 132.9 128 52.3
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 5.8e-29 131.7 102 60.8
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 9.3e-27 124.4 102 55.9
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 1.2e-26 124.0 165 44.8
Medtr3g010950 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-26 122.9 156 42.3
Medtr7g006380 Medicago truncatula HOM05D000147 ORTHO05D004093 4.6e-26 122.1 137 44.5
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-23 114.0 94 59.6
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-23 113.2 103 50.5
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-22 110.9 80 66.2
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 2.4e-22 109.8 121 46.3
Medtr6g034915 Medicago truncatula HOM05D000147 ORTHO05D004093 9.0e-22 107.8 182 35.2
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 9.0e-22 107.8 160 38.8
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 2.6e-21 106.3 111 48.6
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-21 105.9 125 44.0
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-21 105.9 125 44.0
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 4.5e-21 105.5 125 44.0
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 4.5e-21 105.5 125 44.0
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-20 102.1 159 35.8
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-19 100.9 118 44.1
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 2.5e-19 99.8 95 50.5
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 3.2e-19 99.4 102 49.0
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 7.1e-19 98.2 89 51.7
Medtr4g098670 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-18 97.1 109 46.8
Medtr4g094272 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-18 96.7 70 61.4
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 2.1e-18 96.7 102 43.1
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 2.7e-18 96.3 89 51.7
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 7.9e-18 94.7 126 42.1
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-17 94.4 83 54.2
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-17 92.8 118 44.1
Medtr6g016355 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-17 92.8 69 59.4
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 3.0e-17 92.8 106 45.3
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-17 92.4 87 49.4
Medtr1g099430 Medicago truncatula HOM05D000147 ORTHO05D004093 5.1e-17 92.0 98 43.9
Medtr1g062840 Medicago truncatula HOM05D000147 ORTHO05D004093 8.7e-17 91.3 75 60.0
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-16 90.1 101 45.5
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 2.5e-16 89.7 160 35.0
Medtr1g052310 Medicago truncatula HOM05D000147 ORTHO05D004093 4.3e-16 89.0 84 52.4
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 4.3e-16 89.0 98 45.9
TPR.G5236 Trifolium pratense HOM05D000003 ORTHO05D004093 4.3e-16 89.0 160 34.4
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 9.6e-16 87.8 94 43.6
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-15 86.7 102 40.2
Medtr5g037920 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-15 86.3 142 35.9
Medtr3g462490 Medicago truncatula HOM05D000327 ORTHO05D000218 6.2e-15 85.1 63 58.7
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 8.2e-15 84.7 91 45.1
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-14 83.6 88 46.6
Medtr5g085210 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-14 83.6 142 36.6
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-14 83.2 110 41.8
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 2.4e-14 83.2 134 40.3
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 5.3e-14 82.0 104 39.4
Medtr6g046670 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-13 79.3 78 46.2
Medtr2g011830 Medicago truncatula HOM05D000147 ORTHO05D004093 7.6e-13 78.2 66 48.5
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 7.6e-13 78.2 71 50.7
Medtr1g045560 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-12 76.6 109 40.4
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-12 76.6 76 46.1
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 2.9e-12 76.3 120 35.8
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-12 75.5 73 46.6
Medtr1g022215 Medicago truncatula HOM05D000147 ORTHO05D004093 8.4e-12 74.7 67 47.8
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 8.4e-12 74.7 76 43.4
Medtr6g033225 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-11 74.3 85 43.5
Medtr2g055490 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-11 73.9 129 34.9
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-11 73.6 79 43.0
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 4.2e-11 72.4 103 40.8
Medtr5g031620 Medicago truncatula HOM05D000147 ORTHO05D004093 5.5e-11 72.0 106 42.5
Medtr2g017550 Medicago truncatula HOM05D000147 ORTHO05D004093 9.3e-11 71.2 74 44.6
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 9.3e-11 71.2 78 44.9
Medtr2g438450 Medicago truncatula HOM05D000147 ORTHO05D004093 9.3e-11 71.2 93 38.7
Medtr1g057740 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 70.9 143 31.5
Medtr3g071490 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-10 70.5 59 57.6
Medtr1g103580 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-10 69.7 157 30.6
Medtr1g054905 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-10 69.3 67 44.8
Medtr2g047100 Medicago truncatula HOM05D000147 ORTHO05D004093 4.6e-10 68.9 112 41.1
Medtr4g064590 Medicago truncatula HOM05D000147 ORTHO05D004093 4.6e-10 68.9 116 36.2
Medtr7g078610 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-09 67.8 64 46.9
Medtr5g091440 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-09 67.4 132 33.3
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-09 67.0 104 32.7
Medtr1g018300 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-09 66.6 97 38.1
Medtr6g007540 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-09 66.6 55 56.4
Medtr8g045330 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-09 66.6 73 41.1
Medtr8g079540 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-09 65.9 96 37.5
Medtr4g036855 Medicago truncatula HOM05D000147 ORTHO05D004093 8.7e-09 64.7 112 33.9
Medtr1g101650 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-08 64.3 133 33.8
TPR.G18397 Trifolium pratense HOM05D000147 ORTHO05D004093 1.1e-08 64.3 68 41.2
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 1.9e-08 63.5 148 30.4
Medtr5g083510 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-08 63.5 83 43.4
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-08 63.5 71 40.8
Medtr4g046027 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-08 63.2 58 48.3
Medtr5g068115 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-08 62.8 56 50.0
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-08 62.8 104 35.6
Medtr7g006470 Medicago truncatula HOM05D000147 ORTHO05D004093 4.3e-08 62.4 80 38.8
Medtr1g087480 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-07 60.8 55 47.3
Medtr3g466810 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-07 60.8 70 44.3
Medtr4g094370 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-07 60.1 64 42.2
Medtr4g035890 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-07 59.7 57 45.6
Medtr1g079820 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-07 59.3 55 47.3
Medtr1g109000 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-07 59.3 74 40.5
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-07 59.3 63 46.0
Medtr1g074240 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-07 58.9 52 48.1
Medtr3g017480 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-07 58.9 84 40.5
Medtr6g013970 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-07 58.9 110 33.6
Glyma.17G217900 Glycine max HOM05D030711 ORTHO05D046697 6.3e-07 58.5 136 32.4
Nn1g08273 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.2e-07 58.2 129 32.6
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 135 28.9
Medtr3g026270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-06 57.8 46 47.8
Medtr5g047250 Medicago truncatula HOM05D030711 ORTHO05D046697 1.1e-06 57.8 130 33.1
Medtr6g045427 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.4 98 32.7
TPR.G11037 Trifolium pratense HOM05D000147 ORTHO05D004093 1.4e-06 57.4 52 44.2
Medtr1g071800 Medicago truncatula HOM05D000147 ORTHO05D000004 1.8e-06 57.0 95 35.8
Medtr3g090920 Medicago truncatula HOM05D052847 ORTHO05D004093 1.8e-06 57.0 119 33.6
Medtr4g006490 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-06 57.0 53 47.2
Medtr3g449550 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-06 55.5 47 51.1
Medtr7g082560 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-06 55.5 133 29.3
Psat1g044840 Pisum sativum HOM05D000003 ORTHO05D000004 5.3e-06 55.5 138 29.7
CANSAT80G1791 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-06 55.1 129 30.2
Medtr1g052605 Medicago truncatula HOM05D024464 ORTHO05D004093 6.9e-06 55.1 51 51.0
Medtr7g082130 Medicago truncatula HOM05D000147 ORTHO05D004093 6.9e-06 55.1 112 33.0


User provided reference genes

Program Settings