Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g025350 Medicago truncatula HOM05D001648 ORTHO05D001657 4.5e-48 194.1 90 100.0
Medtr2g025290 Medicago truncatula HOM05D001648 ORTHO05D001657 3.4e-19 98.2 47 91.5
Medtr2g025320 Medicago truncatula HOM05D001648 ORTHO05D001657 7.8e-16 87.0 54 68.5
Lj6g0022876 Lotus japonicus HOM05D001648 ORTHO05D001657 3.0e-15 85.1 49 71.4
Medtr2g034150 Medicago truncatula HOM05D001648 ORTHO05D001657 3.0e-15 85.1 49 73.5
Sabra08G0079600 Salix brachista HOM05D001648 ORTHO05D001657 1.1e-14 83.2 56 62.5
Lalb_Chr20g0120871 Lupinus albus HOM05D001648 ORTHO05D001657 1.5e-14 82.8 49 69.4
TPR.G27255 Trifolium pratense HOM05D001648 ORTHO05D001657 1.5e-14 82.8 49 69.4
Thecc.04G300500 Theobroma cacao HOM05D001648 ORTHO05D001657 1.9e-14 82.4 48 72.9
Psat1g161320 Pisum sativum HOM05D001648 ORTHO05D001657 2.5e-14 82.0 62 59.7
QL06p012252 Quercus lobata HOM05D001648 ORTHO05D001657 3.3e-14 81.6 48 70.8
COL.COLO4_34617 Corchorus olitorius HOM05D001648 ORTHO05D001657 4.3e-14 81.3 50 68.0
Ciclev10006815m.g Citrus clementina HOM05D001648 ORTHO05D001657 7.3e-14 80.5 41 82.9
Potri.008G105600 Populus trichocarpa HOM05D001648 ORTHO05D001657 9.6e-14 80.1 48 66.7
arahy.Tifrunner.gnm1.ann1.60J1L7 Arachis hypogaea HOM05D001648 ORTHO05D001657 1.2e-13 79.7 48 68.8
arahy.Tifrunner.gnm1.ann1.C0365L Arachis hypogaea HOM05D001648 ORTHO05D001657 1.2e-13 79.7 48 68.8
GSVIVG01034993001 Vitis vinifera HOM05D001648 ORTHO05D001657 1.2e-13 79.7 48 68.8
Duzib212G0345 Durio zibethinus HOM05D001648 ORTHO05D001657 1.6e-13 79.3 48 68.8
Duzib151G0410 Durio zibethinus HOM05D001648 ORTHO05D001657 2.8e-13 78.6 48 66.7
Cc03_g00850 Coffea canephora HOM05D001648 ORTHO05D001657 3.6e-13 78.2 64 56.2
MBI19_g03241_MAGBIO Magnolia biondii HOM05D001648 ORTHO05D001657 3.6e-13 78.2 48 64.6
Actinidia15604 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.7e-13 77.8 48 64.6
Aqoxy2G02724 Aquilegia oxysepala HOM05D001648 ORTHO05D001657 4.7e-13 77.8 52 63.5
CSS0005046 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 6.2e-13 77.4 68 57.4
Manes.03G204733 Manihot esculenta HOM05D001648 ORTHO05D001657 6.2e-13 77.4 48 66.7
Phvul.006G117900 Phaseolus vulgaris HOM05D001648 ORTHO05D001657 6.2e-13 77.4 48 66.7
ATR0693G172 Amborella trichopoda HOM05D001648 ORTHO05D001657 1.1e-12 76.6 48 62.5
Dinv15171 Davidia involucrata HOM05D001648 ORTHO05D001657 1.1e-12 76.6 48 64.6
Nn3g21727 Nelumbo nucifera HOM05D001648 ORTHO05D001657 1.1e-12 76.6 48 64.6
Nn4g25567 Nelumbo nucifera HOM05D001648 ORTHO05D001657 1.4e-12 76.3 48 62.5
SHI00142 Sapria himalayana HOM05D001648 ORTHO05D001657 1.8e-12 75.9 48 62.5
Atru.chr4.3003 Acer truncatum HOM05D001648 ORTHO05D001657 2.4e-12 75.5 48 64.6
arahy.Tifrunner.gnm1.ann1.F20UL7 Arachis hypogaea HOM05D001648 ORTHO05D001657 3.1e-12 75.1 48 64.6
arahy.Tifrunner.gnm1.ann1.X7Y0SE Arachis hypogaea HOM05D001648 ORTHO05D001657 3.1e-12 75.1 48 64.6
CANSAT78G0019 Cannabis sativa HOM05D001648 ORTHO05D001657 3.1e-12 75.1 48 62.5
CiPaw.01G138800 Carya illinoinensis HOM05D001648 ORTHO05D001657 3.1e-12 75.1 48 64.6
VMungo0540G0532 Vigna mungo HOM05D001648 ORTHO05D001657 4.0e-12 74.7 48 64.6
Potri.010G145501 Populus trichocarpa HOM05D001648 ORTHO05D001657 6.9e-12 73.9 57 56.1
VMungo0540G0987 Vigna mungo HOM05D001648 ORTHO05D001657 6.9e-12 73.9 48 64.6
Haze_01296 Corylus avellana HOM05D001648 ORTHO05D001657 1.2e-11 73.2 50 58.0
Lsat_1_v5_gn_1_41040 Lactuca sativa HOM05D001648 ORTHO05D001657 1.5e-11 72.8 50 64.0
Lj4g0004667 Lotus japonicus HOM05D001648 ORTHO05D001657 2.0e-11 72.4 50 58.0
Rhsim04G0238700 Rhododendron simsii HOM05D001648 ORTHO05D001657 2.0e-11 72.4 49 63.3
Lj4g0020793 Lotus japonicus HOM05D001648 ORTHO05D001657 3.4e-11 71.6 50 58.0
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 4.4e-11 71.2 51 58.8
Glyma.15G184800 Glycine max HOM05D001648 ORTHO05D001657 4.4e-11 71.2 40 75.0
TAR362G1115 Trochodendron aralioides HOM05D001648 ORTHO05D001657 4.4e-11 71.2 49 59.2
Glyma.15G140600 Glycine max HOM05D001648 ORTHO05D001657 7.6e-11 70.5 40 75.0
PGR004G1939 Punica granatum HOM05D001648 ORTHO05D001657 7.6e-11 70.5 52 61.5
Migut.G00059 Erythranthe guttata HOM05D001648 ORTHO05D001657 1.3e-10 69.7 52 57.7
arahy.Tifrunner.gnm1.ann1.8Q9Y6K Arachis hypogaea HOM05D001648 ORTHO05D001657 1.7e-10 69.3 48 60.4
arahy.Tifrunner.gnm1.ann1.GS2INB Arachis hypogaea HOM05D001648 ORTHO05D001657 1.7e-10 69.3 48 60.4
Pp3c15_2600 Physcomitrium patens HOM05D001648 ORTHO05D001657 2.2e-10 68.9 52 50.0
SEGI_37409 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 2.9e-10 68.6 48 56.2
Cpa.g.sc9.59 Carica papaya HOM05D001648 ORTHO05D001657 1.1e-09 66.6 48 58.3
FvH4_4g19680 Fragaria vesca HOM05D001648 ORTHO05D001657 1.4e-09 66.2 74 48.6
Sed0017670 Sechium edule HOM05D001648 ORTHO05D001657 1.4e-09 66.2 50 54.0
Peaxi162Scf00120g00014 Petunia axillaris HOM05D001648 ORTHO05D001657 1.9e-09 65.9 70 42.9
FAN07G0572 Fragaria x ananassa HOM05D001648 ORTHO05D001657 2.4e-09 65.5 45 66.7
FAN12G4038 Fragaria x ananassa HOM05D001648 ORTHO05D001657 3.2e-09 65.1 74 47.3
Psat0ss8330g0280 Pisum sativum HOM05D001648 ORTHO05D001657 3.2e-09 65.1 68 42.6
TPR.G11098 Trifolium pratense HOM05D001648 ORTHO05D001657 3.2e-09 65.1 49 55.1
Mapoly0020s0056 Marchantia polymorpha HOM05D001648 ORTHO05D001657 4.2e-09 64.7 50 48.0
Pp3c19_9830 Physcomitrium patens HOM05D001648 ORTHO05D001657 5.4e-09 64.3 48 52.1
Aqoxy3G02894 Aquilegia oxysepala HOM05D001648 ORTHO05D001657 7.1e-09 63.9 48 54.2
SMO197G0103 Selaginella moellendorffii HOM05D001648 ORTHO05D001657 7.1e-09 63.9 49 55.1
PSO170G2428 Papaver somniferum HOM05D001648 ORTHO05D001657 9.3e-09 63.5 50 60.0
SMO116G0188 Selaginella moellendorffii HOM05D001648 ORTHO05D001657 1.2e-08 63.2 47 55.3
Mapoly0020s0057 Marchantia polymorpha HOM05D001648 ORTHO05D001657 1.6e-08 62.8 45 55.6
Medtr4g122090 Medicago truncatula HOM05D001648 ORTHO05D001657 1.6e-08 62.8 88 37.5
Pp3c22_22416 Physcomitrium patens HOM05D001648 ORTHO05D001657 4.6e-08 61.2 50 50.0
Pp3c17_9810 Physcomitrium patens HOM05D001648 ORTHO05D001657 6.0e-08 60.8 48 45.8
CSS0048173 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 7.8e-08 60.5 49 51.0
Pp3c5_9010 Physcomitrium patens HOM05D001648 ORTHO05D001657 7.8e-08 60.5 48 50.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.0e-07 60.1 49 53.1
Eucgr.H04043 Eucalyptus grandis HOM05D001648 ORTHO05D001657 1.0e-07 60.1 43 65.1
Pp3c9_1600 Physcomitrium patens HOM05D001648 ORTHO05D001657 5.1e-07 57.8 41 53.7


User provided reference genes

Program Settings