Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g022500 Medicago truncatula HOM05D001270 ORTHO05D001099 3.3e-30 134.4 69 100.0
Medtr1g069620 Medicago truncatula HOM05D001270 ORTHO05D001099 4.4e-19 97.4 57 86.0
TPR.G5664 Trifolium pratense HOM05D001270 ORTHO05D001099 3.2e-17 91.3 57 78.9
Psat6g061800 Pisum sativum HOM05D001270 ORTHO05D001099 4.2e-17 90.9 58 79.3
Ca_09657_v3 Cicer arietinum L. HOM05D001270 ORTHO05D001099 3.5e-16 87.8 52 82.7
Phvul.007G190500 Phaseolus vulgaris HOM05D001270 ORTHO05D001099 2.8e-13 78.2 56 75.0
Glyma.10G039400 Glycine max HOM05D001270 ORTHO05D001099 3.6e-13 77.8 58 72.4
VMungo0720G1599 Vigna mungo HOM05D001270 ORTHO05D001099 3.6e-13 77.8 56 75.0
Glyma.13G125800 Glycine max HOM05D001861 ORTHO05D001099 9.0e-12 73.2 56 71.4
Eucgr.A01365 Eucalyptus grandis HOM05D001270 ORTHO05D001099 3.2e-09 64.7 56 58.9
Lj5g0003890 Lotus japonicus HOM05D001270 ORTHO05D001099 7.1e-09 63.5 56 66.1
QL09p040867 Quercus lobata HOM05D001270 ORTHO05D001099 7.9e-08 60.1 53 58.5
RcHm_v2.0_Chr6g0287281 Rosa chinensis HOM05D001270 ORTHO05D001099 1.3e-07 59.3 56 51.8
Haze_24677 Corylus avellana HOM05D001270 ORTHO05D001099 1.8e-07 58.9 56 57.1
Haze_24685 Corylus avellana HOM05D001270 ORTHO05D001099 1.8e-07 58.9 56 57.1
FvH4_2g20870 Fragaria vesca HOM05D001270 ORTHO05D001099 1.8e-07 58.9 56 51.8
FAN15G0294 Fragaria x ananassa HOM05D001270 ORTHO05D001099 1.8e-07 58.9 56 51.8
FAN27G2467 Fragaria x ananassa HOM05D001270 ORTHO05D001099 1.8e-07 58.9 56 51.8
Potri.014G195400 Populus trichocarpa HOM05D001270 ORTHO05D001099 3.0e-07 58.2 58 46.6
MD05G1192300 Malus domestica HOM05D001270 ORTHO05D001099 3.9e-07 57.8 58 48.3
Lj1A71T64 Lonicera japonica HOM05D001270 ORTHO05D001099 5.1e-07 57.4 58 48.3
Ciclev10018912m.g Citrus clementina HOM05D001270 ORTHO05D001099 6.7e-07 57.0 58 50.0
FAN20G2190 Fragaria x ananassa HOM05D001270 ORTHO05D001099 6.7e-07 57.0 56 50.0
Prupe.8G218600 Prunus persica HOM05D001270 ORTHO05D001099 1.1e-06 56.2 58 46.6
Actinidia37537 Actinidia chinensis HOM05D001270 ORTHO05D001099 1.9e-06 55.5 53 52.8
Dinv34657 Davidia involucrata HOM05D001270 ORTHO05D001099 1.9e-06 55.5 56 48.2
Cc01_g18000 Coffea canephora HOM05D001270 ORTHO05D001099 4.3e-06 54.3 57 43.9
Gohir.A11G132500 Gossypium hirsutum HOM05D001270 ORTHO05D001099 4.3e-06 54.3 55 41.8
Atru.chr5.1788 Acer truncatum HOM05D001270 ORTHO05D001099 5.6e-06 53.9 56 48.2
Atru.chr5.1797 Acer truncatum HOM05D001270 ORTHO05D001099 5.6e-06 53.9 56 48.2
PGSC0003DMG400024291 Solanum tuberosum HOM05D001270 ORTHO05D001099 7.4e-06 53.5 57 43.9
TWI12G1085 Tripterygium wilfordii HOM05D001270 ORTHO05D001099 7.4e-06 53.5 58 48.3
Peaxi162Scf00415g00042 Petunia axillaris HOM05D001270 ORTHO05D001099 9.6e-06 53.1 56 50.0


User provided reference genes

Program Settings