Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g022360 Medicago truncatula HOM05D005989 ORTHO05D000022 9.8e-28 125.9 58 100.0
Medtr8g479410 Medicago truncatula HOM05D005989 ORTHO05D000022 3.1e-13 77.8 50 64.0
TPR.G13740 Trifolium pratense HOM05D005989 ORTHO05D000022 1.7e-11 72.0 53 52.8
Psat2g155160 Pisum sativum HOM05D005989 ORTHO05D000022 2.2e-11 71.6 52 57.7
Atru.chr2.2454 Acer truncatum HOM05D005989 ORTHO05D000022 1.3e-08 62.4 47 53.2
Psat0s1775g0320 Pisum sativum HOM05D005989 ORTHO05D000022 1.3e-08 62.4 49 57.1
TPR.G23861 Trifolium pratense HOM05D005989 ORTHO05D000022 3.9e-08 60.8 52 44.2
Atru.chr1.1636 Acer truncatum HOM05D005989 ORTHO05D000022 5.1e-08 60.5 47 53.2
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 5.1e-08 60.5 49 49.0
Phvul.004G137000 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 6.6e-08 60.1 56 44.6
Glyma.13G358333 Glycine max HOM05D005989 ORTHO05D000022 8.6e-08 59.7 56 42.9
TPR.G15449 Trifolium pratense HOM05D005989 ORTHO05D000022 1.5e-07 58.9 49 55.1
TPR.G6692 Trifolium pratense HOM05D005989 ORTHO05D000022 5.6e-07 57.0 66 45.5
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 7.3e-07 56.6 47 55.3
Lalb_Chr08g0232201 Lupinus albus HOM05D005989 ORTHO05D000022 9.5e-07 56.2 49 46.9
Medtr1g083630 Medicago truncatula HOM05D000008 ORTHO05D000005 9.5e-07 56.2 43 44.2
Medtr7g059380 Medicago truncatula HOM05D005989 ORTHO05D000022 1.2e-06 55.8 44 54.5
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 1.6e-06 55.5 46 54.3
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 1.6e-06 55.5 46 54.3
Lalb_Chr02g0160271 Lupinus albus HOM05D005989 ORTHO05D000022 2.1e-06 55.1 46 45.7
Lalb_Chr18g0052711 Lupinus albus HOM05D005989 ORTHO05D000022 2.1e-06 55.1 54 40.7
Phvul.010G021300 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 2.1e-06 55.1 51 39.2
RcHm_v2.0_Chr2g0133661 Rosa chinensis HOM05D000155 ORTHO05D000022 2.1e-06 55.1 45 48.9
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-06 55.1 46 54.3
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-06 55.1 46 54.3
RcHm_v2.0_Chr3g0454631 Rosa chinensis HOM05D002340 ORTHO05D003624 2.1e-06 55.1 45 48.9
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 2.1e-06 55.1 46 54.3
TPR.G37438 Trifolium pratense HOM05D005989 ORTHO05D000022 2.8e-06 54.7 57 43.9
Lalb_Chr06g0169621 Lupinus albus HOM05D005989 ORTHO05D000022 3.6e-06 54.3 63 36.5
RcHm_v2.0_Chr3g0459251 Rosa chinensis HOM05D005989 ORTHO05D000022 3.6e-06 54.3 53 47.2
RcHm_v2.0_Chr4g0395061 Rosa chinensis HOM05D005989 ORTHO05D000022 3.6e-06 54.3 53 47.2
RcHm_v2.0_Chr2g0129631 Rosa chinensis HOM05D005989 ORTHO05D000651 6.2e-06 53.5 51 51.0
TPR.G36653 Trifolium pratense HOM05D000003 ORTHO05D000006 6.2e-06 53.5 53 45.3
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 8.1e-06 53.1 47 51.1


User provided reference genes

Program Settings