Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g022010 Medicago truncatula HOM05D008992 ORTHO05D002272 1.6e-162 576.2 330 100.0
Medtr8g089530 Medicago truncatula HOM05D008992 ORTHO05D002272 7.5e-48 195.3 291 47.4
Medtr8g089440 Medicago truncatula HOM05D008992 ORTHO05D002272 2.0e-37 160.6 283 41.7
Ca_17802_v3 Cicer arietinum L. HOM05D008992 ORTHO05D002272 7.5e-32 142.1 250 42.4
Medtr2g006000 Medicago truncatula HOM05D008992 ORTHO05D002272 1.7e-31 141.0 261 40.6
Medtr8g089500 Medicago truncatula HOM05D008992 ORTHO05D002272 2.3e-28 130.6 267 40.1
Medtr8g089480 Medicago truncatula HOM05D008992 ORTHO05D002272 4.3e-27 126.3 281 38.1
Ca_03843_v3 Cicer arietinum L. HOM05D008992 ORTHO05D002272 3.1e-25 120.2 282 36.2
Psat0s3155g0080 Pisum sativum HOM05D008992 ORTHO05D002272 3.4e-24 116.7 223 39.9
TPR.G6204 Trifolium pratense HOM05D008992 ORTHO05D002272 1.3e-23 114.8 299 36.8
TPR.G6199 Trifolium pratense HOM05D008992 ORTHO05D002272 7.1e-22 109.0 354 32.2
Psat0s921g0280 Pisum sativum HOM05D008992 ORTHO05D002272 1.6e-21 107.8 212 38.7
Ca_16626_v3 Cicer arietinum L. HOM05D008992 ORTHO05D002272 2.7e-21 107.1 219 40.2
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 8.6e-20 102.1 163 40.5
Psat7g060160 Pisum sativum HOM05D008992 ORTHO05D002272 2.5e-19 100.5 207 39.6
TPR.G6214 Trifolium pratense HOM05D008992 ORTHO05D002272 2.5e-19 100.5 100 54.0
TPR.G35385 Trifolium pratense HOM05D008992 ORTHO05D002272 7.6e-16 89.0 117 45.3
Lj1g0000579 Lotus japonicus HOM05D008992 ORTHO05D002272 6.0e-13 79.3 227 31.7
Medtr4g417280 Medicago truncatula HOM05D000053 ORTHO05D002272 3.9e-12 76.6 180 36.1
Lj4g0020153 Lotus japonicus HOM05D008992 ORTHO05D002272 7.3e-11 72.4 82 47.6
Lj4g0011648 Lotus japonicus HOM05D008992 ORTHO05D002272 3.6e-10 70.1 68 54.4
Medtr4g417290 Medicago truncatula HOM05D008992 ORTHO05D002272 4.7e-10 69.7 88 47.7
VMungo0251G0856 Vigna mungo HOM05D008992 ORTHO05D002272 1.1e-09 68.6 138 37.7
COL.COLO4_31049 Corchorus olitorius HOM05D002972 ORTHO05D002272 2.4e-09 67.4 122 41.0
COL.COLO4_22001 Corchorus olitorius HOM05D002972 ORTHO05D002272 3.1e-09 67.0 179 31.8
Lj4g0010390 Lotus japonicus HOM05D008992 ORTHO05D002272 2.6e-08 63.9 101 40.6
Medtr8g089435 Medicago truncatula HOM05D008992 ORTHO05D002272 2.6e-08 63.9 53 58.5
vmacro17724 Vaccinium macrocarpon HOM05D002972 ORTHO05D002272 2.6e-08 63.9 143 31.5
Lalb_Chr07g0185621 Lupinus albus HOM05D008992 ORTHO05D002272 4.4e-08 63.2 120 36.7
Lj4A209T45 Lonicera japonica HOM05D002972 ORTHO05D002272 9.9e-08 62.0 150 32.7
Hma1.2p1_1114F.1_g258730 Hydrangea macrophylla HOM05D002972 ORTHO05D002272 2.2e-07 60.8 85 43.5
Rhsim08G0123100 Rhododendron simsii HOM05D002972 ORTHO05D002272 6.4e-07 59.3 136 32.4
COL.COLO4_22003 Corchorus olitorius HOM05D002972 ORTHO05D002272 1.1e-06 58.5 136 36.8
Glyma.08G129502 Glycine max HOM05D008992 ORTHO05D002272 3.2e-06 57.0 87 42.5
arahy.Tifrunner.gnm1.ann1.1MNX0Y Arachis hypogaea HOM05D008992 ORTHO05D002272 4.2e-06 56.6 62 51.6
Dinv10222 Davidia involucrata HOM05D002972 ORTHO05D002272 4.2e-06 56.6 218 28.4
Cpa.g.sc6.181 Carica papaya HOM05D002972 ORTHO05D002272 7.1e-06 55.8 177 28.8


User provided reference genes

Program Settings