Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g021620 Medicago truncatula HOM05D040056 ORTHO05D025862 1.5e-166 589.3 287 100.0
Medtr6g033945 Medicago truncatula HOM05D040056 ORTHO05D025862 2.2e-67 260.0 285 55.4
Medtr1g060700 Medicago truncatula HOM05D003734 ORTHO05D004270 7.4e-60 235.0 151 84.1
Medtr5g084280 Medicago truncatula HOM05D040056 ORTHO05D025862 1.8e-37 160.6 82 93.9
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 2.9e-32 143.3 207 36.7
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 7.5e-28 128.6 93 58.1
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 1.5e-23 114.4 98 54.1
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 5.0e-16 89.4 67 62.7
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 8.6e-16 88.6 135 37.8
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 3.3e-15 86.7 131 40.5
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 7.3e-15 85.5 122 34.4
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 8.0e-14 82.0 149 33.6
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 8.0e-14 82.0 191 33.5
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 6.8e-13 79.0 130 36.9
Medtr0042s0170 Medicago truncatula HOM05D007499 ORTHO05D009491 1.5e-12 77.8 94 50.0
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 2.6e-12 77.0 87 35.6
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 2.6e-12 77.0 87 35.6
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 5.8e-12 75.9 116 33.6
Psat6g105800 Pisum sativum HOM05D002090 ORTHO05D001923 1.3e-11 74.7 93 36.6
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.7e-11 74.3 104 33.7
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-10 71.6 165 32.7
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 5.4e-10 69.3 94 31.9
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 7.0e-10 68.9 86 37.2
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 9.2e-10 68.6 202 27.2
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 1.2e-09 68.2 94 30.9
TPR.G17441 Trifolium pratense HOM05D002090 ORTHO05D001923 1.2e-09 68.2 88 38.6
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 2.0e-09 67.4 105 30.5
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 2.7e-09 67.0 94 30.9
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 3.5e-09 66.6 91 33.0
Lalb_Chr06g0171231 Lupinus albus HOM05D002090 ORTHO05D001923 3.5e-09 66.6 111 29.7
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 3.5e-09 66.6 121 27.3
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 3.5e-09 66.6 136 26.5
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 4.6e-09 66.2 98 35.7
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 6.0e-09 65.9 89 31.5
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 6.0e-09 65.9 89 31.5
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 7.8e-09 65.5 94 30.9
Medtr1g011320 Medicago truncatula HOM05D002090 ORTHO05D001923 1.3e-08 64.7 122 32.8
TPR.G39946 Trifolium pratense HOM05D002090 ORTHO05D001923 2.3e-08 63.9 88 36.4
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 3.9e-08 63.2 101 28.7
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 5.0e-08 62.8 91 30.8
Ca_22739_v3 Cicer arietinum L. HOM05D002090 ORTHO05D001923 6.6e-08 62.4 131 26.7
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 6.6e-08 62.4 98 33.7
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 8.6e-08 62.0 102 38.2
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-07 61.6 123 26.8
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 1.5e-07 61.2 94 30.9
Lalb_Chr02g0157091 Lupinus albus HOM05D002090 ORTHO05D001923 2.5e-07 60.5 85 32.9
TPR.G17007 Trifolium pratense HOM05D002090 ORTHO05D001923 3.3e-07 60.1 84 34.5
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 4.3e-07 59.7 130 31.5
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 7.3e-07 58.9 91 29.7
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 9.5e-07 58.5 67 41.8
Medtr3g082920 Medicago truncatula HOM05D000168 ORTHO05D048861 9.5e-07 58.5 44 68.2
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 1.2e-06 58.2 67 44.8
Glyma.16G116932 Glycine max HOM05D002090 ORTHO05D001923 1.6e-06 57.8 79 30.4
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.6e-06 57.8 130 30.0
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 2.1e-06 57.4 91 29.7
Psat1g078840 Pisum sativum HOM05D062135 ORTHO05D015180 2.1e-06 57.4 64 37.5
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 2.8e-06 57.0 144 28.5
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 3.6e-06 56.6 130 29.2
TPR.G39726 Trifolium pratense HOM05D007499 ORTHO05D009491 3.6e-06 56.6 63 39.7
DCAR_010369 Daucus carota HOM05D012849 ORTHO05D000065 4.7e-06 56.2 111 31.5
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 6.2e-06 55.8 90 28.9
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 8.0e-06 55.5 150 28.7


User provided reference genes

Program Settings