Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g021080 Medicago truncatula HOM05D000672 ORTHO05D265053 1.6e-82 309.3 146 100.0
Ca_00889_v3 Cicer arietinum L. HOM05D000672 ORTHO05D000522 6.7e-09 64.7 49 71.4
Medtr2g031610 Medicago truncatula HOM05D000672 ORTHO05D000522 6.7e-09 64.7 49 71.4
Psat1g164840 Pisum sativum HOM05D000672 ORTHO05D000522 6.7e-09 64.7 49 71.4
TPR.G15186 Trifolium pratense HOM05D000672 ORTHO05D000522 6.7e-09 64.7 49 71.4
Haze_05931 Corylus avellana HOM05D000672 ORTHO05D000522 3.3e-08 62.4 49 65.3
Phvul.006G124500 Phaseolus vulgaris HOM05D000672 ORTHO05D000522 5.7e-08 61.6 49 67.3
Aa31LG6G11910 Aethionema arabicum HOM05D000672 ORTHO05D000522 7.5e-08 61.2 45 66.7
Lj6g0007223 Lotus japonicus HOM05D000672 ORTHO05D000522 1.7e-07 60.1 49 63.3
Atru.chr3.2924 Acer truncatum HOM05D000672 ORTHO05D000522 2.2e-07 59.7 49 65.3
RcHm_v2.0_Chr5g0018181 Rosa chinensis HOM05D000672 ORTHO05D000522 2.2e-07 59.7 49 65.3
VMungo0540G1453 Vigna mungo HOM05D000672 ORTHO05D000522 2.2e-07 59.7 49 65.3
arahy.Tifrunner.gnm1.ann1.C4XWSY Arachis hypogaea HOM05D000672 ORTHO05D000522 2.8e-07 59.3 45 66.7
arahy.Tifrunner.gnm1.ann1.MUE9LA Arachis hypogaea HOM05D000672 ORTHO05D000522 2.8e-07 59.3 45 66.7
Cfa000781 Carpinus fangiana HOM05D000672 ORTHO05D000522 2.8e-07 59.3 49 63.3
FvH4_3g11240 Fragaria vesca HOM05D000672 ORTHO05D000522 2.8e-07 59.3 49 63.3
FAN16G2244 Fragaria x ananassa HOM05D000672 ORTHO05D000522 2.8e-07 59.3 49 63.3
QL05p064483 Quercus lobata HOM05D000672 ORTHO05D000522 2.8e-07 59.3 49 61.2
ClCG03G008460 Citrullus lanatus HOM05D000672 ORTHO05D000522 4.8e-07 58.5 49 63.3
CsaV3_1G037550 Cucumis sativus L. HOM05D000672 ORTHO05D000522 4.8e-07 58.5 49 63.3
Glyma.09G028400 Glycine max HOM05D000672 ORTHO05D000522 4.8e-07 58.5 49 65.3
Sed0025745 Sechium edule HOM05D000672 ORTHO05D000522 4.8e-07 58.5 49 63.3
FAN21G1199 Fragaria x ananassa HOM05D000672 ORTHO05D000522 6.3e-07 58.2 49 63.3
Lalb_Chr18g0058231 Lupinus albus HOM05D000672 ORTHO05D000522 6.3e-07 58.2 49 63.3
Medtr8g016985 Medicago truncatula HOM05D000003 ORTHO05D000004 6.3e-07 58.2 60 40.0
TWI15G0477 Tripterygium wilfordii HOM05D000672 ORTHO05D000522 6.3e-07 58.2 64 53.1
CANSAT35G1071 Cannabis sativa HOM05D000672 ORTHO05D000522 8.2e-07 57.8 45 60.0
Thhalv10007252m.g Eutrema salsugineum HOM05D000672 ORTHO05D000522 8.2e-07 57.8 48 64.6
COL.COLO4_22893 Corchorus olitorius HOM05D000672 ORTHO05D000522 1.1e-06 57.4 49 59.2
Glyma.15G134400 Glycine max HOM05D000672 ORTHO05D000522 1.1e-06 57.4 49 63.3
Zm00001eb390180 Zea mays HOM05D000672 ORTHO05D000522 1.1e-06 57.4 45 62.2
Gohir.D02G106800 Gossypium hirsutum HOM05D000672 ORTHO05D000522 1.4e-06 57.0 49 61.2
Gorai.005G121300 Gossypium raimondii HOM05D000672 ORTHO05D000522 1.4e-06 57.0 49 61.2
Manes.06G052100 Manihot esculenta HOM05D000672 ORTHO05D000522 1.4e-06 57.0 49 61.2
PGR083G2371 Punica granatum HOM05D000672 ORTHO05D000522 1.4e-06 57.0 52 57.7
Eucgr.D01627 Eucalyptus grandis HOM05D000672 ORTHO05D000522 1.8e-06 56.6 49 61.2
FAN25G0609 Fragaria x ananassa HOM05D000672 ORTHO05D000522 1.8e-06 56.6 49 61.2
Prupe.4G099600 Prunus persica HOM05D000672 ORTHO05D000522 1.8e-06 56.6 98 37.8
THA.LOC104814343 Tarenaya hassleriana HOM05D000672 ORTHO05D000522 1.8e-06 56.6 49 61.2
Aa31LG10G6490 Aethionema arabicum HOM05D000672 ORTHO05D000522 2.4e-06 56.2 49 59.2
Carub.0001s2897 Capsella rubella HOM05D000672 ORTHO05D000522 2.4e-06 56.2 49 59.2
AUR62022253 Chenopodium quinoa HOM05D000672 ORTHO05D000522 2.4e-06 56.2 52 51.9
AUR62031968 Chenopodium quinoa HOM05D000672 ORTHO05D000522 2.4e-06 56.2 52 51.9
Cc09_g07370 Coffea canephora HOM05D000672 ORTHO05D000522 2.4e-06 56.2 46 56.5
CiPaw.09G146300 Carya illinoinensis HOM05D000672 ORTHO05D000522 3.1e-06 55.8 49 57.1
Ciclev10015053m.g Citrus clementina HOM05D000672 ORTHO05D000522 3.1e-06 55.8 49 59.2
MD05G1266100 Malus domestica HOM05D000672 ORTHO05D000522 3.1e-06 55.8 49 59.2
Manes.14G125600 Manihot esculenta HOM05D000672 ORTHO05D000522 3.1e-06 55.8 49 61.2
Rhsim13G0124500 Rhododendron simsii HOM05D000672 ORTHO05D000522 3.1e-06 55.8 48 60.4
MELO3C002863.2 Cucumis melo HOM05D000672 ORTHO05D000522 4.1e-06 55.5 49 61.2
DCAR_000836 Daucus carota HOM05D000672 ORTHO05D000522 4.1e-06 55.5 45 57.8
Duzib235G0756 Durio zibethinus HOM05D000672 ORTHO05D000522 4.1e-06 55.5 49 59.2
Hund07641 Selenicereus undatus HOM05D000672 ORTHO05D000522 4.1e-06 55.5 45 57.8
TWI38G1420 Tripterygium wilfordii HOM05D000672 ORTHO05D000522 4.1e-06 55.5 64 50.0
C07p15000 Brassica napus HOM05D000672 ORTHO05D000522 5.3e-06 55.1 45 60.0
BolC7t42003H Brassica oleracea HOM05D000672 ORTHO05D000522 5.3e-06 55.1 45 60.0
Cpa.g.sc1465.1 Carica papaya HOM05D000672 ORTHO05D000522 5.3e-06 55.1 49 59.2
Thhalv10009675m.g Eutrema salsugineum HOM05D000672 ORTHO05D000522 5.3e-06 55.1 45 57.8
Thecc.06G011300 Theobroma cacao HOM05D000672 ORTHO05D000522 5.3e-06 55.1 49 57.1
Nitab4.5_0011416g0010 Nicotiana tabacum HOM05D000672 ORTHO05D000522 7.0e-06 54.7 45 57.8
TAR629G2188 Trochodendron aralioides HOM05D000672 ORTHO05D000522 7.0e-06 54.7 48 62.5
Actinidia27554 Actinidia chinensis HOM05D000672 ORTHO05D000522 9.1e-06 54.3 48 58.3
A07p09750 Brassica napus HOM05D000672 ORTHO05D000522 9.1e-06 54.3 42 61.9
BraA07t28768Z Brassica rapa HOM05D000672 ORTHO05D000522 9.1e-06 54.3 42 61.9
Lj2A336G36 Lonicera japonica HOM05D000672 ORTHO05D000522 9.1e-06 54.3 45 57.8
MD05G1265900 Malus domestica HOM05D000672 ORTHO05D000522 9.1e-06 54.3 49 57.1
Oeu063155.1 Olea europaea HOM05D000672 ORTHO05D000522 9.1e-06 54.3 45 55.6
TAR627G0665 Trochodendron aralioides HOM05D000672 ORTHO05D000522 9.1e-06 54.3 48 60.4
vmacro03473 Vaccinium macrocarpon HOM05D000672 ORTHO05D000522 9.1e-06 54.3 48 56.2


User provided reference genes

Program Settings