Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 0.0e+00 1213.7 567 100.0
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-192 677.2 605 59.5
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 4.7e-191 671.8 599 59.4
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 7.5e-189 664.5 599 59.4
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.0e-185 654.1 597 57.1
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 3.6e-183 645.6 591 58.4
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 1.3e-143 514.2 450 60.7
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 1.3e-129 467.6 608 45.7
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 6.2e-119 432.2 573 45.7
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 7.9e-106 388.7 631 41.2
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 1.4e-70 271.6 343 43.4
Medtr2g020070 Medicago truncatula HOM05D003035 ORTHO05D000440 2.3e-68 264.2 229 57.6
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 5.2e-65 253.1 331 43.8
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 5.9e-61 239.6 625 31.8
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 5.9e-61 239.6 624 32.1
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 7.8e-61 239.2 626 31.8
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.1e-59 235.3 582 30.2
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 4.7e-58 229.9 610 33.3
Medtr2g020150 Medicago truncatula HOM05D003035 ORTHO05D000440 3.1e-57 227.3 326 43.9
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 4.0e-57 226.9 281 42.7
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 4.0e-57 226.9 603 32.7
Medtr2g020080 Medicago truncatula HOM05D001286 ORTHO05D000440 1.3e-55 221.9 170 65.3
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 1.4e-49 201.8 278 42.8
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 1.2e-48 198.7 314 39.5
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 3.7e-47 193.7 608 29.6
Medtr2g034630 Medicago truncatula HOM05D003035 ORTHO05D000440 8.3e-47 192.6 228 47.4
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 8.1e-42 176.0 540 28.7
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 8.9e-41 172.6 606 27.6
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.1e-38 165.6 610 25.7
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 7.8e-37 159.5 314 35.4
Medtr2g034620 Medicago truncatula HOM05D003035 ORTHO05D000440 7.8e-37 159.5 85 88.2
TPR.G9947 Trifolium pratense HOM05D003035 ORTHO05D000440 1.0e-36 159.1 163 52.8
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 3.9e-36 157.1 608 27.0
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 6.6e-36 156.4 310 34.8
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 8.1e-34 149.4 603 26.0
ECA233G2298 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.8e-33 148.3 584 26.5
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 4.0e-33 147.1 528 26.3
TPR.G4578 Trifolium pratense HOM05D003035 ORTHO05D000440 6.8e-33 146.4 118 62.7
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 8.9e-33 146.0 613 26.4
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 4.4e-32 143.7 594 26.8
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 6.4e-31 139.8 334 34.1
ECA248G2686 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.1e-30 139.0 469 27.5
TPR.G101 Trifolium pratense HOM05D003035 ORTHO05D000440 1.6e-29 135.2 145 53.1
HanXRQChr01g0025361 Helianthus annuus HOM05D008265 ORTHO05D000440 1.0e-28 132.5 537 26.4
HanXRQChr01g0025311 Helianthus annuus HOM05D008265 ORTHO05D000440 1.3e-28 132.1 463 29.4
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 1.1e-27 129.0 532 24.4
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 2.5e-27 127.9 604 25.2
ECA247G0747 Erigeron canadensis HOM05D008265 ORTHO05D000440 5.6e-27 126.7 546 26.9
ECA248G3255 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.1e-26 124.8 530 27.5
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 1.1e-25 122.5 348 30.2
ECA248G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-25 122.5 544 25.2
ECA248G1799 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.1e-25 122.5 519 26.0
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-25 120.9 554 24.4
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 4.0e-25 120.6 649 25.3
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 5.3e-25 120.2 646 25.2
QL08p010298 Quercus lobata HOM05D003035 ORTHO05D000440 2.6e-24 117.9 231 36.8
HanXRQChr01g0025341 Helianthus annuus HOM05D008265 ORTHO05D000440 9.9e-24 115.9 539 24.5
HanXRQChr01g0024941 Helianthus annuus HOM05D008265 ORTHO05D000440 2.2e-23 114.8 476 25.2
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.4e-23 113.2 341 29.0
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-22 112.5 667 24.7
Lalb_Chr23g0273461 Lupinus albus HOM05D003035 ORTHO05D000440 1.9e-22 111.7 602 23.3
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 1.0e-20 105.9 311 29.3
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-20 104.8 642 25.1
Hund25016 Selenicereus undatus HOM05D003035 ORTHO05D000440 2.3e-20 104.8 652 23.6
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-19 102.1 610 24.4
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 3.3e-19 100.9 640 24.7
ECA248G1816 Erigeron canadensis HOM05D008265 ORTHO05D000440 4.3e-19 100.5 472 24.4
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 7.4e-19 99.8 665 24.7
HanXRQChr01g0027421 Helianthus annuus HOM05D008265 ORTHO05D000440 1.6e-18 98.6 554 26.0
HanXRQChr01g0025321 Helianthus annuus HOM05D008265 ORTHO05D000440 3.6e-18 97.4 521 24.6
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-17 95.9 649 24.0
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-17 94.7 314 27.4
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-17 94.4 369 25.7
Hund24679 Selenicereus undatus HOM05D003035 ORTHO05D000440 4.0e-17 94.0 572 22.4
PSO210G0865 Papaver somniferum HOM05D003035 ORTHO05D000440 5.3e-17 93.6 624 22.9
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 6.9e-17 93.2 331 27.5
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.2e-16 92.4 323 26.6
Medtr3g055670 Medicago truncatula HOM05D003035 ORTHO05D000440 1.5e-16 92.0 118 42.4
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.5e-16 90.5 397 25.2
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.8e-16 90.1 323 26.6
ECA234G4146 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.3e-15 89.0 493 24.9
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-15 88.6 383 26.6
ECA248G3232 Erigeron canadensis HOM05D001491 ORTHO05D001443 2.9e-15 87.8 263 28.9
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.8e-15 87.4 324 25.6
PSO017G5637 Papaver somniferum HOM05D003035 ORTHO05D000440 4.9e-15 87.0 380 26.6
Actinidia14222 Actinidia chinensis HOM05D003035 ORTHO05D000440 6.4e-15 86.7 243 31.3
Thecc.07G034700 Theobroma cacao HOM05D003035 ORTHO05D006294 1.1e-14 85.9 360 24.7
TAR383G0168 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.9e-14 85.1 227 28.6
PSO541G3776 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-14 84.7 238 28.6
PSO675G2226 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-14 84.7 250 32.0
ECA248G1061 Erigeron canadensis HOM05D008265 ORTHO05D000440 4.2e-14 84.0 558 22.8
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 4.2e-14 84.0 360 25.6
PSO339G4296 Papaver somniferum HOM05D003035 ORTHO05D000440 5.5e-14 83.6 489 22.7
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 3.5e-13 80.9 322 25.2
ECA234G0206 Erigeron canadensis HOM05D008265 ORTHO05D000440 6.0e-13 80.1 380 24.5
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-13 80.1 310 28.7
ECA248G3052 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.8e-12 78.6 323 26.0
COL.COLO4_15278 Corchorus olitorius HOM05D001286 ORTHO05D000440 8.7e-12 76.3 469 26.0
TWI39G1174 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 8.7e-12 76.3 227 30.0
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.9e-11 75.1 272 25.0
PSO541G2264 Papaver somniferum HOM05D001286 ORTHO05D000440 2.5e-11 74.7 221 29.0
TWI39G1245 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 2.5e-11 74.7 226 27.9
ECA248G1569 Erigeron canadensis HOM05D005758 ORTHO05D007218 4.3e-11 73.9 472 23.1
ECA248G3082 Erigeron canadensis HOM05D008265 ORTHO05D000440 5.6e-11 73.6 315 25.7
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 9.6e-11 72.8 322 24.2
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-10 72.4 319 23.2
Rhsim08G0205300 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.6e-10 72.0 232 28.9
TAR627G0263 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.1e-10 71.6 294 23.1
Dinv36214 Davidia involucrata HOM05D001286 ORTHO05D000440 6.2e-10 70.1 126 38.1
CARHR166590 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.1e-09 69.3 169 29.0
ECA248G0149 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.4e-09 68.2 168 35.1
AL5G37800 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 3.1e-09 67.8 206 27.7
COL.COLO4_12692 Corchorus olitorius HOM05D000713 ORTHO05D000547 5.3e-09 67.0 479 24.6
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 5.3e-09 67.0 319 25.4
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 5.3e-09 67.0 364 23.1
Gohir.A08G212150 Gossypium hirsutum HOM05D001286 ORTHO05D000440 6.9e-09 66.6 227 27.8
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 1.2e-08 65.9 220 31.4
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-08 65.5 333 23.7
Rhsim08G0205000 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-08 65.5 163 33.1
PSO210G5554 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-08 65.1 237 30.4
PSO210G6800 Papaver somniferum HOM05D001286 ORTHO05D000440 2.0e-08 65.1 227 29.5
HanXRQChr01g0026991 Helianthus annuus HOM05D008265 ORTHO05D000440 2.6e-08 64.7 146 32.9
Carub.0005s2324 Capsella rubella HOM05D001286 ORTHO05D000440 4.5e-08 63.9 153 29.4
CARHR094100 Cardamine hirsuta HOM05D001286 ORTHO05D000440 7.6e-08 63.2 140 34.3
QL04p042652 Quercus lobata HOM05D001286 ORTHO05D000440 1.0e-07 62.8 193 30.1
QL04p042669 Quercus lobata HOM05D001286 ORTHO05D000440 1.0e-07 62.8 193 30.1
TAR633G0845 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.0e-07 62.8 218 27.1
ECA248G2594 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.7e-07 62.0 206 29.6
QL04p042600 Quercus lobata HOM05D001286 ORTHO05D000440 1.7e-07 62.0 159 31.4
AT3G56470 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 2.9e-07 61.2 197 29.4
A09p49390 Brassica napus HOM05D001050 ORTHO05D001270 4.9e-07 60.5 155 27.7
C02p18620 Brassica napus HOM05D001286 ORTHO05D000440 4.9e-07 60.5 159 27.7
BraA09t40392Z Brassica rapa HOM05D001050 ORTHO05D001270 4.9e-07 60.5 155 27.7
TWI77G1030 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 4.9e-07 60.5 231 24.2
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 6.5e-07 60.1 235 28.9
CARHR036030 Cardamine hirsuta HOM05D001286 ORTHO05D000440 8.4e-07 59.7 159 33.3
TPR.G23322 Trifolium pratense HOM05D001286 ORTHO05D000440 8.4e-07 59.7 167 32.3
PSO210G1834 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-06 59.3 214 29.9
A02p11260 Brassica napus HOM05D001286 ORTHO05D000440 1.4e-06 58.9 165 29.1
C08p31760 Brassica napus HOM05D001286 ORTHO05D000440 1.4e-06 58.9 161 26.7
BraA02t06188Z Brassica rapa HOM05D001286 ORTHO05D000440 1.4e-06 58.9 165 29.1
ECA240G2902 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.4e-06 58.9 122 33.6
Gorai.013G207100 Gossypium raimondii HOM05D001286 ORTHO05D000440 1.4e-06 58.9 191 26.7
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-06 58.9 140 32.1
QL04p042854 Quercus lobata HOM05D001286 ORTHO05D000440 1.4e-06 58.9 191 29.3
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.9e-06 58.5 126 30.2
AT3G18720 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 3.2e-06 57.8 150 26.0
BolC2t09692H Brassica oleracea HOM05D001286 ORTHO05D000440 3.2e-06 57.8 165 28.5
TAR636G2462 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.2e-06 57.8 237 24.9
Ca_00899_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 4.2e-06 57.4 141 31.2
PSO339G1403 Papaver somniferum HOM05D003035 ORTHO05D000440 4.2e-06 57.4 124 32.3
BcaB01g03228 Brassica carinata HOM05D001286 ORTHO05D000440 5.5e-06 57.0 180 28.3
Medtr1g059840 Medicago truncatula HOM05D001286 ORTHO05D000440 5.5e-06 57.0 141 31.9
Psat6g080440 Pisum sativum HOM05D001286 ORTHO05D000440 5.5e-06 57.0 159 29.6
RcHm_v2.0_Chr3g0473881 Rosa chinensis HOM05D001286 ORTHO05D000440 7.1e-06 56.6 219 26.9
Prupe.8G252900 Prunus persica HOM05D001286 ORTHO05D000440 9.3e-06 56.2 149 30.2
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 9.3e-06 56.2 163 31.3


User provided reference genes

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