Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g020010 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-154 547.7 275 100.0
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 4.5e-38 162.5 122 64.8
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-37 160.2 122 63.9
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 8.4e-37 158.3 122 63.1
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-20 102.8 116 43.1
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 6.1e-19 99.0 112 43.8
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 7.9e-19 98.6 112 43.8
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.0e-14 84.0 96 44.8
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.8e-13 79.7 100 37.0
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 9.4e-12 75.1 94 34.0
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.2e-11 74.7 82 40.2
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.6e-11 73.2 137 32.1
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 1.4e-10 71.2 112 33.9
Lj5g0006790 Lotus japonicus HOM05D007848 ORTHO05D000174 4.4e-09 66.2 118 26.3
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 9.7e-09 65.1 118 28.8
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-08 64.7 118 28.8
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.7e-08 64.3 115 27.8
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-08 64.3 118 28.8
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 2.2e-08 63.9 118 28.8
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 2.2e-08 63.9 118 28.8
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 2.2e-08 63.9 118 28.8
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.7e-08 63.2 158 27.2
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 3.7e-08 63.2 158 27.2
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 3.7e-08 63.2 103 34.0
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 4.8e-08 62.8 88 37.5
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 4.8e-08 62.8 158 26.6
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 4.8e-08 62.8 118 28.8
Medtr4g028320 Medicago truncatula HOM05D007848 ORTHO05D000174 4.8e-08 62.8 133 28.6
TPR.G1533 Trifolium pratense HOM05D007848 ORTHO05D000174 4.8e-08 62.8 90 35.6
Medtr7g117425 Medicago truncatula HOM05D007848 ORTHO05D000174 6.3e-08 62.4 88 34.1
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-07 61.6 118 28.0
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 1.4e-07 61.2 180 26.1
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 1.8e-07 60.8 118 28.0
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 1.8e-07 60.8 117 30.8
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 3.1e-07 60.1 115 33.0
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 4.1e-07 59.7 171 26.9
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
arahy.Tifrunner.gnm1.ann1.HMM5RD Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 93 32.3
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-07 59.3 115 33.9
Psat4g107960 Pisum sativum HOM05D016976 ORTHO05D000174 7.0e-07 58.9 80 37.5
Medtr3g463070 Medicago truncatula HOM05D007848 ORTHO05D000174 9.1e-07 58.5 69 37.7
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 9.1e-07 58.5 118 26.3
Medtr8g467450 Medicago truncatula HOM05D000353 ORTHO05D008317 9.1e-07 58.5 94 35.1
arahy.Tifrunner.gnm1.ann1.3QWG3L Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.8 158 26.6
arahy.Tifrunner.gnm1.ann1.BHF996 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.0e-06 57.4 165 27.3
Medtr2g062200 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-06 57.4 61 41.0
arahy.Tifrunner.gnm1.ann1.NFD50Z Arachis hypogaea HOM05D000353 ORTHO05D000174 3.5e-06 56.6 204 23.5
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 7.7e-06 55.5 196 26.0
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 7.7e-06 55.5 98 30.6


User provided reference genes

Program Settings