Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g016640 Medicago truncatula HOM05D013241 ORTHO05D011012 0.0e+00 1189.9 609 100.0
TPR.G4557 Trifolium pratense HOM05D013241 ORTHO05D011012 9.7e-243 843.6 638 73.0
Ca_00458_v3 Cicer arietinum L. HOM05D013241 ORTHO05D011012 3.1e-225 785.4 612 70.9
Psat1g195680 Pisum sativum HOM05D013241 ORTHO05D011012 2.7e-176 622.9 497 71.0
Lj6g0008807 Lotus japonicus HOM05D013241 ORTHO05D011012 8.9e-172 607.8 653 57.3
Lalb_Chr18g0054711 Lupinus albus HOM05D013241 ORTHO05D011012 5.8e-147 525.4 657 51.3
arahy.Tifrunner.gnm1.ann1.62N0H4 Arachis hypogaea HOM05D000074 ORTHO05D011012 1.5e-142 510.8 637 50.1
arahy.Tifrunner.gnm1.ann1.69Z0CE Arachis hypogaea HOM05D013241 ORTHO05D011012 4.3e-142 509.2 637 50.1
Glyma.13G227600 Glycine max HOM05D013241 ORTHO05D011012 1.8e-135 487.3 608 51.8
Phvul.006G174000 Phaseolus vulgaris HOM05D013241 ORTHO05D011012 1.4e-124 451.1 617 48.9
VMungo0540G2099 Vigna mungo HOM05D013241 ORTHO05D011012 1.5e-123 447.6 606 48.0
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 1.6e-32 145.2 413 30.3
Haze_09217 Corylus avellana HOM05D013249 ORTHO05D011012 7.1e-28 129.8 545 28.4
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 1.3e-24 119.0 421 27.6
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 1.3e-21 109.0 419 26.5
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 1.3e-21 109.0 427 27.4
Lalb_Chr20g0117541 Lupinus albus HOM05D013241 ORTHO05D011012 9.3e-20 102.8 93 54.8
Medtr1g071870 Medicago truncatula HOM05D013241 ORTHO05D011012 1.5e-17 95.5 98 53.1
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.3e-17 94.0 425 28.0
CiPaw.12G074500 Carya illinoinensis HOM05D011672 ORTHO05D011012 2.8e-16 91.3 272 30.9
TWI81G0792 Tripterygium wilfordii HOM05D011672 ORTHO05D011012 7.6e-14 83.2 399 24.1
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 2.2e-13 81.6 399 26.3
Potri.011G149601 Populus trichocarpa HOM05D011672 ORTHO05D011012 5.0e-13 80.5 356 26.1
Sabra11G0134500 Salix brachista HOM05D011672 ORTHO05D011012 3.6e-11 74.3 342 27.8
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.6e-11 73.9 491 25.7
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 1.0e-10 72.8 473 26.0
Duzib068G0278 Durio zibethinus HOM05D011672 ORTHO05D011012 1.4e-10 72.4 465 24.3
Thecc.03G215600 Theobroma cacao HOM05D011672 ORTHO05D011012 3.3e-09 67.8 495 23.4
COL.COLO4_10845 Corchorus olitorius HOM05D011672 ORTHO05D011012 4.8e-08 63.9 424 24.3
Gohir.D12G243700 Gossypium hirsutum HOM05D011672 ORTHO05D011012 1.4e-07 62.4 291 23.7
FAN13G1375 Fragaria x ananassa HOM05D013249 ORTHO05D011012 9.1e-07 59.7 246 26.4
Gorai.008G261200 Gossypium raimondii HOM05D011672 ORTHO05D011012 9.1e-07 59.7 297 26.6
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 2.6e-06 58.2 412 24.5
FvH4_5g10390 Fragaria vesca HOM05D013249 ORTHO05D011012 3.4e-06 57.8 226 27.0
FAN18G3072 Fragaria x ananassa HOM05D013249 ORTHO05D011012 3.4e-06 57.8 226 27.0
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 4.5e-06 57.4 441 21.3
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 5.9e-06 57.0 522 21.5
FAN08G0662 Fragaria x ananassa HOM05D013249 ORTHO05D011012 7.7e-06 56.6 162 29.0


User provided reference genes

Program Settings