Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 7.2e-93 344.0 183 100.0
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 7.1e-56 221.1 149 79.2
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 3.1e-51 205.7 140 75.0
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 5.1e-46 188.3 140 73.6
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.5e-45 186.8 141 74.5
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 6.4e-41 171.4 143 65.0
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 2.4e-40 169.5 139 69.1
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 2.7e-39 166.0 147 66.0
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 7.8e-39 164.5 143 63.6
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 1.7e-38 163.3 139 65.5
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.3e-37 158.7 134 65.7
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 9.6e-37 157.5 146 64.4
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 1.1e-35 154.1 145 61.4
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 6.9e-35 151.4 143 60.1
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.3e-33 147.1 142 59.2
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.3e-33 147.1 138 64.5
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.7e-33 146.7 144 62.5
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 2.9e-33 146.0 150 58.7
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 2.9e-33 146.0 150 58.0
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.4e-32 143.7 145 51.7
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 7.9e-31 137.9 129 55.0
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 7.9e-31 137.9 142 54.9
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.3e-30 137.1 144 54.2
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 1.3e-30 137.1 134 56.0
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 5.1e-30 135.2 142 52.8
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 5.6e-29 131.7 144 50.0
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 1.3e-28 130.6 130 53.8
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 2.1e-28 129.8 144 48.6
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 1.8e-27 126.7 139 51.1
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 5.3e-27 125.2 139 48.9
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.9e-27 124.8 143 48.3
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 1.5e-26 123.6 139 50.4
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 2.0e-26 123.2 138 51.4
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 3.4e-26 122.5 149 47.0
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 9.9e-26 120.9 140 48.6
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 9.9e-26 120.9 143 47.6
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 1.7e-25 120.2 133 48.9
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.7e-25 120.2 140 50.7
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 2.2e-25 119.8 98 66.3
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 2.9e-25 119.4 141 51.1
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 4.9e-25 118.6 140 50.7
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.4e-24 117.1 150 46.7
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.4e-24 117.1 150 46.7
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.9e-24 116.7 139 47.5
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 2.4e-24 116.3 149 49.0
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.2e-24 115.5 150 46.0
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 7.1e-24 114.8 137 48.9
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 7.1e-24 114.8 133 48.9
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.6e-23 113.6 142 48.6
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 5.1e-22 108.6 140 47.1
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 8.7e-22 107.8 142 47.9
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 8.7e-22 107.8 142 47.2
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 2.8e-20 102.8 144 41.7
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 4.8e-20 102.1 153 41.2
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 6.2e-20 101.7 139 46.0
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 1.4e-19 100.5 132 46.2
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.8e-19 100.1 129 46.5
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 3.1e-19 99.4 142 42.3
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 4.0e-19 99.0 132 47.7
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 9.0e-19 97.8 137 41.6
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.2e-18 97.4 143 41.3
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 3.4e-18 95.9 136 41.9
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.5e-18 95.5 147 40.1
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 7.6e-18 94.7 146 39.7
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 4.9e-17 92.0 146 38.4
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 4.9e-17 92.0 140 41.4
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 4.9e-17 92.0 130 43.8
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.1e-16 90.9 141 44.0
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 1.1e-16 90.9 143 41.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 2.5e-16 89.7 121 46.3
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.5e-16 89.7 126 43.7
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 3.2e-16 89.4 136 39.7
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 9.3e-16 87.8 125 41.6
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 1.6e-15 87.0 143 40.6
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 2.1e-15 86.7 133 42.9
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 3.5e-15 85.9 148 39.9
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 6.0e-15 85.1 126 42.1
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 5.1e-14 82.0 138 42.0
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 7.4e-13 78.2 123 40.7
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 1.6e-12 77.0 83 53.0
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 2.2e-12 76.6 104 44.2
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 6.3e-12 75.1 119 40.3
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 8.2e-12 74.7 144 38.2
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 8.2e-12 74.7 124 40.3
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.2e-10 70.9 137 38.7
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.5e-10 70.5 101 40.6
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.5e-10 70.5 122 39.3
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 4.5e-10 68.9 93 43.0
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 5.9e-10 68.6 140 35.0
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.3e-09 67.4 78 46.2
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 1.7e-09 67.0 60 58.3
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.5e-08 62.0 148 34.5
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 7.2e-08 61.6 83 48.2
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.6e-07 60.5 63 49.2
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 2.7e-07 59.7 84 41.7
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 6.1e-07 58.5 69 50.7
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 6.1e-07 58.5 69 50.7
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.0e-06 57.8 69 50.7
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 3.9e-06 55.8 74 47.3
Aqoxy4G02910 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 6.7e-06 55.1 79 46.8
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 6.7e-06 55.1 69 50.7
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 6.7e-06 55.1 79 45.6
Mapoly0541s0001 Marchantia polymorpha HOM05D007507 ORTHO05D009420 8.8e-06 54.7 75 41.3
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 8.8e-06 54.7 66 48.5
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 8.8e-06 54.7 71 47.9


User provided reference genes

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