Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g009180 Medicago truncatula HOM05D003288 ORTHO05D003734 1.9e-46 188.7 90 100.0
Medtr2g093230 Medicago truncatula HOM05D003288 ORTHO05D003734 6.2e-13 77.4 119 39.5
Psat0s1991g0080 Pisum sativum HOM05D003288 ORTHO05D003734 5.3e-12 74.3 120 38.3
Lj2g0015416 Lotus japonicus HOM05D003288 ORTHO05D003734 1.2e-11 73.2 127 38.6
Glyma.17G080975 Glycine max HOM05D003288 ORTHO05D003734 2.6e-11 72.0 129 34.9
Medtr6g091980 Medicago truncatula HOM05D003288 ORTHO05D003734 5.8e-11 70.9 113 37.2
Medtr2g063823 Medicago truncatula HOM05D003288 ORTHO05D003734 7.6e-11 70.5 113 37.2
Sabra17G0111500 Salix brachista HOM05D003288 ORTHO05D003734 7.6e-11 70.5 119 36.1
Sabra17G0111800 Salix brachista HOM05D003288 ORTHO05D003734 7.6e-11 70.5 119 36.1
Glyma.05G018700 Glycine max HOM05D003288 ORTHO05D003734 9.9e-11 70.1 124 36.3
Glyma.18G042400 Glycine max HOM05D003288 ORTHO05D003734 9.9e-11 70.1 127 37.0
Sabra17G0114500 Salix brachista HOM05D003288 ORTHO05D003734 1.3e-10 69.7 119 36.1
Psat1g016080 Pisum sativum HOM05D003288 ORTHO05D003734 1.7e-10 69.3 110 36.4
TPR.G37900 Trifolium pratense HOM05D003288 ORTHO05D003734 1.7e-10 69.3 120 38.3
Lalb_Chr05g0212271 Lupinus albus HOM05D003288 ORTHO05D003734 2.2e-10 68.9 124 36.3
Medtr2g063863 Medicago truncatula HOM05D003288 ORTHO05D003734 2.2e-10 68.9 113 36.3
Medtr2g063920 Medicago truncatula HOM05D003288 ORTHO05D003734 3.8e-10 68.2 113 36.3
Lj5g0021383 Lotus japonicus HOM05D003288 ORTHO05D003734 4.9e-10 67.8 127 37.8
QL01p032763 Quercus lobata HOM05D003288 ORTHO05D003734 8.4e-10 67.0 129 33.3
TPR.G8950 Trifolium pratense HOM05D003288 ORTHO05D003734 1.4e-09 66.2 122 36.9
Lalb_Chr15g0085041 Lupinus albus HOM05D003288 ORTHO05D003734 2.4e-09 65.5 122 35.2
arahy.Tifrunner.gnm1.ann1.BXR7J4 Arachis hypogaea HOM05D003288 ORTHO05D003734 3.2e-09 65.1 115 37.4
Glyma.11G214200 Glycine max HOM05D003288 ORTHO05D003734 4.2e-09 64.7 126 33.3
VMungo1383G3441 Vigna mungo HOM05D003288 ORTHO05D003734 5.4e-09 64.3 119 36.1
arahy.Tifrunner.gnm1.ann1.NZ46DJ Arachis hypogaea HOM05D003288 ORTHO05D003734 9.3e-09 63.5 115 37.4
Phvul.001G228800 Phaseolus vulgaris HOM05D003288 ORTHO05D003734 1.2e-08 63.2 119 35.3
arahy.Tifrunner.gnm1.ann1.F6RFY9 Arachis hypogaea HOM05D003288 ORTHO05D003734 1.6e-08 62.8 127 33.1
arahy.Tifrunner.gnm1.ann1.G6QY2G Arachis hypogaea HOM05D003288 ORTHO05D003734 1.6e-08 62.8 127 33.1
Thecc.04G002400 Theobroma cacao HOM05D003288 ORTHO05D003734 2.7e-08 62.0 115 33.0
Ca_03338_v3 Cicer arietinum L. HOM05D003288 ORTHO05D003734 3.5e-08 61.6 121 34.7
MD09G1266100 Malus domestica HOM05D003288 ORTHO05D003734 7.8e-08 60.5 113 33.6
Prupe.3G163900 Prunus persica HOM05D003288 ORTHO05D003734 1.0e-07 60.1 123 33.3
Thecc.04G002200 Theobroma cacao HOM05D003288 ORTHO05D003734 1.3e-07 59.7 90 38.9
Ciclev10011340m.g Citrus clementina HOM05D003288 ORTHO05D003734 5.1e-07 57.8 116 30.2
Potri.017G137100 Populus trichocarpa HOM05D003288 ORTHO05D003734 5.1e-07 57.8 119 29.4
Manes.02G079400 Manihot esculenta HOM05D003288 ORTHO05D003734 6.6e-07 57.4 109 36.7
Duzib268G1591 Durio zibethinus HOM05D003288 ORTHO05D003734 1.1e-06 56.6 113 31.9
CsaV3_4G000640 Cucumis sativus L. HOM05D003288 ORTHO05D003734 7.3e-06 53.9 114 32.5


User provided reference genes

Program Settings