Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g115280 Medicago truncatula HOM05D000002 ORTHO05D023815 4.1e-59 231.1 110 100.0
Ah.04g154410 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-11 72.8 43 76.7
CSS0005552 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-08 62.4 43 67.4
CSS0025606 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-08 62.4 43 67.4
CSS0038035 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-08 62.4 43 67.4
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 4.3e-08 61.6 76 48.7
GSVIVG01014104001 Vitis vinifera HOM05D000043 ORTHO05D000223 2.1e-07 59.3 76 44.7
THA.LOC104801859 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 2.8e-07 58.9 64 43.8
EL10Ac2g03400 Beta vulgaris HOM05D000002 ORTHO05D023815 1.1e-06 57.0 47 51.1
ECA232G2531 Erigeron canadensis HOM05D000620 ORTHO05D000537 1.1e-06 57.0 61 49.2
CSS0005851 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 56.6 45 57.8
ECA232G4604 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 61 49.2
CSS0026966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.1 45 57.8
Thecc.04G110300 Theobroma cacao HOM05D000002 ORTHO05D010765 5.3e-06 54.7 43 62.8
ECA232G0086 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA232G0970 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 61 47.5
ECA232G1993 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA232G3490 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA233G0511 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA233G0623 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA233G2911 Erigeron canadensis HOM05D000002 ORTHO05D001134 9.0e-06 53.9 41 61.0
ECA233G4344 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA234G1050 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA236G0116 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA236G0811 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA236G0974 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA236G2482 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA236G4726 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 73 43.8
ECA238G0523 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA240G3441 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA240G3538 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA246G2321 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 61.0
ECA247G1980 Erigeron canadensis HOM05D000315 ORTHO05D000001 9.0e-06 53.9 41 61.0
RcHm_v2.0_Chr1g0368461 Rosa chinensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 41 53.7


User provided reference genes

Program Settings