Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g105770 Medicago truncatula HOM05D004101 ORTHO05D005221 2.5e-36 154.8 74 100.0
Medtr4g033490 Medicago truncatula HOM05D004101 ORTHO05D005221 1.9e-15 85.5 81 56.8
Psat7g146680 Pisum sativum HOM05D004101 ORTHO05D005221 3.3e-12 74.7 84 51.2
Medtr5g080490 Medicago truncatula HOM05D004101 ORTHO05D005221 1.6e-11 72.4 63 61.9
Ca_19680_v3 Cicer arietinum L. HOM05D004101 ORTHO05D005221 6.9e-10 67.0 89 47.2
Glyma.09G234500 Glycine max HOM05D004101 ORTHO05D005221 7.6e-09 63.5 81 46.9
Phvul.011G002700 Phaseolus vulgaris HOM05D004101 ORTHO05D005221 3.8e-08 61.2 81 45.7
VMungo1127G2207 Vigna mungo HOM05D004101 ORTHO05D005221 4.9e-08 60.8 81 44.4
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea HOM05D004101 ORTHO05D005221 8.4e-08 60.1 81 46.9
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea HOM05D004101 ORTHO05D005221 8.4e-08 60.1 81 46.9
TPR.G31924 Trifolium pratense HOM05D004101 ORTHO05D005221 3.2e-07 58.2 62 54.8
BcaC07g37755 Brassica carinata HOM05D004101 ORTHO05D005221 4.2e-07 57.8 84 40.5
BolC8t48140H Brassica oleracea HOM05D004101 ORTHO05D005221 4.2e-07 57.8 84 40.5
Cpa.g.sc24.85 Carica papaya HOM05D004101 ORTHO05D005221 4.2e-07 57.8 70 45.7
Manes.02G221381 Manihot esculenta HOM05D004101 ORTHO05D005221 4.2e-07 57.8 70 47.1
Potri.019G072300 Populus trichocarpa HOM05D004101 ORTHO05D005221 4.2e-07 57.8 85 40.0
Sabra19G0083800 Salix brachista HOM05D004101 ORTHO05D005221 4.2e-07 57.8 74 43.2
Potri.013G099700 Populus trichocarpa HOM05D004101 ORTHO05D005221 5.5e-07 57.4 72 44.4
Aa31LG2G14460 Aethionema arabicum HOM05D004101 ORTHO05D005221 7.1e-07 57.0 70 45.7
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
BcaB07g32808 Brassica carinata HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
CARHR287040 Cardamine hirsuta HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
Thhalv10006721m.g Eutrema salsugineum HOM05D004101 ORTHO05D005221 9.3e-07 56.6 70 44.3
TWI18G0503 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 9.3e-07 56.6 79 40.5
A08p10530 Brassica napus HOM05D004101 ORTHO05D005221 1.6e-06 55.8 84 39.3
BraA08t33053Z Brassica rapa HOM05D004101 ORTHO05D005221 1.6e-06 55.8 84 39.3
Gohir.D05G255640 Gossypium hirsutum HOM05D004101 ORTHO05D005221 1.6e-06 55.8 70 45.7
Gorai.009G267200 Gossypium raimondii HOM05D004101 ORTHO05D005221 1.6e-06 55.8 70 45.7
Nn5g27278 Nelumbo nucifera HOM05D004101 ORTHO05D005221 1.6e-06 55.8 70 44.3
SEGI_28351 Sequoiadendron giganteum HOM05D004101 ORTHO05D005221 1.6e-06 55.8 69 42.0
TWI12G0255 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 1.6e-06 55.8 81 38.3
MD15G1088500 Malus domestica HOM05D004101 ORTHO05D005221 2.1e-06 55.5 70 42.9
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 2.1e-06 55.5 78 42.3
Aa31LG9G15840 Aethionema arabicum HOM05D004101 ORTHO05D005221 2.7e-06 55.1 70 42.9
CANSAT21G1017 Cannabis sativa HOM05D004101 ORTHO05D005221 2.7e-06 55.1 82 41.5
Lalb_Chr16g0391261 Lupinus albus HOM05D004101 ORTHO05D005221 2.7e-06 55.1 70 42.9
MD08G1108000 Malus domestica HOM05D004101 ORTHO05D005221 3.5e-06 54.7 72 40.3
BcaB04g18154 Brassica carinata HOM05D004101 ORTHO05D005221 4.6e-06 54.3 70 42.9
CiPaw.03G015400 Carya illinoinensis HOM05D004101 ORTHO05D005221 4.6e-06 54.3 70 42.9
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 6.0e-06 53.9 69 43.5
A09p34730 Brassica napus HOM05D004101 ORTHO05D005221 6.0e-06 53.9 70 42.9
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 6.0e-06 53.9 69 43.5
Manes.18G117901 Manihot esculenta HOM05D004101 ORTHO05D005221 6.0e-06 53.9 70 44.3
PGR042G3616 Punica granatum HOM05D004101 ORTHO05D005221 6.0e-06 53.9 70 41.4
TAR625G0099 Trochodendron aralioides HOM05D004101 ORTHO05D005221 6.0e-06 53.9 70 42.9
Aqoxy6G00101 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 7.9e-06 53.5 69 43.5
Aqoxy6G01398 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 7.9e-06 53.5 69 43.5
PSO017G3151 Papaver somniferum HOM05D004101 ORTHO05D005221 7.9e-06 53.5 77 40.3
Thecc.08G177600 Theobroma cacao HOM05D004101 ORTHO05D005221 7.9e-06 53.5 70 44.3
TAR383G0434 Trochodendron aralioides HOM05D004101 ORTHO05D005221 7.9e-06 53.5 70 42.9


User provided reference genes

Program Settings