Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g103650 Medicago truncatula HOM05D005989 ORTHO05D000022 1.1e-77 293.1 137 100.0
TPR.G18735 Trifolium pratense HOM05D000901 ORTHO05D001160 2.3e-11 72.8 55 58.2
TPR.G28456 Trifolium pratense HOM05D009299 ORTHO05D022921 8.8e-11 70.9 60 53.3
FvH4_4g01331 Fragaria vesca HOM05D005989 ORTHO05D000022 2.0e-10 69.7 108 36.1
RcHm_v2.0_Chr2g0129631 Rosa chinensis HOM05D005989 ORTHO05D000651 3.4e-10 68.9 108 35.2
RcHm_v2.0_Chr6g0258241 Rosa chinensis HOM05D005989 ORTHO05D000022 2.8e-09 65.9 108 30.6
Lalb_Chr21g0306271 Lupinus albus HOM05D005989 ORTHO05D000022 3.7e-09 65.5 102 36.3
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 3.1e-08 62.4 91 34.1
MD02G1021900 Malus domestica HOM05D000003 ORTHO05D037873 2.0e-07 59.7 88 37.5
RcHm_v2.0_Chr1g0352021 Rosa chinensis HOM05D005989 ORTHO05D000022 5.9e-07 58.2 91 33.0
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 7.7e-07 57.8 107 31.8
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 7.7e-07 57.8 108 30.6
Aqoxy3G02379 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 57.0 89 29.2
Aqoxy1G02799 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-06 56.6 87 33.3
Aqoxy2G01899 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.7e-06 56.6 101 28.7
Atru.chr4.468 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 76 31.6
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-06 55.5 117 33.3
RcHm_v2.0_Chr6g0299951 Rosa chinensis HOM05D005989 ORTHO05D000022 3.8e-06 55.5 74 33.8
RcHm_v2.0_Chr5g0070711 Rosa chinensis HOM05D013124 ORTHO05D011902 6.6e-06 54.7 59 44.1


User provided reference genes

Program Settings