Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 3.6e-230 801.2 397 100.0
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.9e-186 656.0 396 84.3
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 2.1e-158 562.8 386 71.5
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.0e-156 556.2 400 71.5
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 1.7e-155 553.1 320 84.4
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 2.9e-155 552.4 398 71.6
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 5.0e-147 525.0 398 68.3
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.9e-130 469.9 329 69.3
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.0e-120 435.6 321 66.4
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 4.5e-108 395.6 295 65.4
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 9.5e-106 387.9 299 64.5
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.6e-105 387.1 290 62.4
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 2.6e-103 379.8 296 63.2
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.3e-102 377.5 298 62.8
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 4.9e-102 375.6 292 62.7
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 8.3e-102 374.8 338 56.8
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.4e-101 374.0 301 60.5
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.2e-100 370.9 294 61.6
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.6e-100 370.5 301 61.1
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 4.5e-100 369.0 294 61.6
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 5.9e-100 368.6 312 59.3
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.9e-100 368.6 294 61.2
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 7.8e-100 368.2 296 60.8
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 7.8e-100 368.2 366 54.1
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.1e-98 364.4 296 62.2
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.5e-98 364.0 386 51.0
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.5e-98 364.0 290 61.4
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.9e-98 363.6 294 61.9
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 7.3e-98 361.7 294 59.9
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 7.3e-98 361.7 291 62.2
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.8e-97 359.8 302 59.3
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.6e-97 359.4 311 58.5
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 3.6e-97 359.4 393 52.7
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 4.7e-97 359.0 294 57.1
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 8.0e-97 358.2 302 59.6
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.4e-96 357.5 295 60.7
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 2.3e-96 356.7 377 52.0
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 4.0e-96 355.9 305 56.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 6.8e-96 355.1 293 58.7
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 6.8e-96 355.1 294 59.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 8.9e-96 354.8 293 59.4
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 9.8e-95 351.3 295 60.3
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 4.9e-94 349.0 301 55.8
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 8.3e-94 348.2 304 55.9
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.9e-93 347.1 286 59.1
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 7.0e-93 345.1 311 53.4
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.2e-92 344.4 301 58.8
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 3.5e-92 342.8 281 61.2
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.3e-91 340.1 298 56.0
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 3.9e-91 339.3 296 56.4
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 6.6e-91 338.6 298 58.4
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 1.1e-90 337.8 293 56.0
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.9e-90 337.0 298 55.0
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 2.5e-90 336.7 287 57.8
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 5.6e-90 335.5 297 58.2
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.6e-89 334.0 286 55.2
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 2.1e-89 333.6 301 55.5
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.8e-89 333.2 295 56.3
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 2.8e-89 333.2 301 55.1
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 2.8e-89 333.2 301 54.8
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 6.2e-89 332.0 289 54.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 8.0e-89 331.6 365 49.0
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 3.1e-88 329.7 285 56.8
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 4.0e-88 329.3 292 56.5
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 5.2e-88 328.9 294 57.1
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 6.8e-88 328.6 285 54.0
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 8.9e-88 328.2 312 54.2
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 3.4e-87 326.2 294 55.1
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 4.4e-87 325.9 305 56.7
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 5.8e-87 325.5 308 55.8
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.2e-86 323.6 308 56.8
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.9e-86 323.2 291 54.3
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 6.4e-86 322.0 403 45.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 8.3e-86 321.6 293 52.9
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.4e-85 320.9 289 54.3
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 3.5e-84 316.2 291 53.3
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 3.5e-84 316.2 291 53.3
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 6.0e-84 315.5 323 52.6
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 3.0e-83 313.2 326 51.5
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 6.6e-83 312.0 293 53.6
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.2e-81 307.8 300 53.0
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.8e-80 303.9 311 49.8
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 8.3e-78 295.0 287 54.0
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 2.4e-77 293.5 225 61.8
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 4.6e-76 289.3 287 50.9
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 3.0e-75 286.6 237 58.2
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.6e-74 282.3 250 56.4
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 8.1e-73 278.5 272 51.8
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 4.0e-72 276.2 293 49.1
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.7e-68 263.5 222 59.0
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 1.5e-66 257.7 302 43.4
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 6.4e-54 215.7 316 39.6
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.1e-52 210.7 304 37.5
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 5.3e-48 196.1 310 36.5
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.2e-45 186.4 158 58.9
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 7.4e-42 175.6 239 41.8
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 5.3e-40 169.5 294 33.0
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 3.4e-39 166.8 162 53.1
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 7.6e-39 165.6 166 53.6
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 2.5e-37 160.6 295 31.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.8e-30 136.7 131 56.5
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 2.5e-29 134.0 140 53.6
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 3.0e-27 127.1 82 67.1
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 7.7e-23 112.5 101 56.4
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 2.2e-22 110.9 274 29.6
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.9e-22 110.5 135 46.7
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.1e-21 108.6 91 58.2
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.1e-16 92.0 276 26.4
Lalb_Chr16g0388181 Lupinus albus HOM05D007297 ORTHO05D009352 1.3e-06 58.5 39 76.9


User provided reference genes

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