Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g102820 Medicago truncatula HOM05D003667 ORTHO05D004397 3.3e-47 191.4 102 100.0
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 9.5e-18 93.6 64 78.1
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 2.8e-17 92.0 60 81.7
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 2.6e-15 85.5 64 70.3
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 1.8e-13 79.3 57 73.7
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 4.1e-13 78.2 60 75.0
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 5.0e-11 71.2 60 66.7
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 5.0e-11 71.2 57 66.7
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 4.3e-10 68.2 57 66.7
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 2.8e-09 65.5 57 59.6
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 6.2e-09 64.3 58 62.1
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 1.1e-08 63.5 63 55.6
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 1.1e-08 63.5 57 61.4
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.8e-08 62.8 65 55.4
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.3e-08 62.4 64 56.2
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.3e-08 62.4 64 56.2
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 2.3e-08 62.4 62 58.1
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 2.3e-08 62.4 63 54.0
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 3.1e-08 62.0 58 58.6
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 8.9e-08 60.5 59 57.6
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 8.9e-08 60.5 60 58.3
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 1.2e-07 60.1 60 55.0
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.2e-07 60.1 61 59.0
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.2e-07 60.1 57 59.6
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.5e-07 59.7 57 59.6
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 1.5e-07 59.7 57 59.6
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 1.5e-07 59.7 57 59.6
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.0e-07 59.3 61 57.4
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 2.0e-07 59.3 62 54.8
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 2.0e-07 59.3 58 62.1
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 2.6e-07 58.9 63 52.4
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 3.4e-07 58.5 61 52.5
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 3.4e-07 58.5 57 57.9
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 4.4e-07 58.2 57 52.6
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 5.8e-07 57.8 58 55.2
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 5.8e-07 57.8 57 59.6
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 7.5e-07 57.4 62 53.2
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 9.8e-07 57.0 58 51.7
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 9.8e-07 57.0 60 53.3
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 9.8e-07 57.0 61 54.1
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.3e-06 56.6 58 58.6
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 1.3e-06 56.6 57 50.9
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 1.3e-06 56.6 60 56.7
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 1.7e-06 56.2 57 56.1
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.7e-06 56.2 64 56.2
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 2.2e-06 55.8 57 56.1
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.2e-06 55.8 63 50.8
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.2e-06 55.8 63 50.8
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 2.9e-06 55.5 64 53.1
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 2.9e-06 55.5 61 52.5
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 3.7e-06 55.1 64 51.6
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 3.7e-06 55.1 64 51.6
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 3.7e-06 55.1 64 51.6
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 3.7e-06 55.1 61 50.8
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 3.7e-06 55.1 57 56.1
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 4.9e-06 54.7 57 52.6
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 4.9e-06 54.7 57 52.6
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 8.3e-06 53.9 57 57.9


User provided reference genes

Program Settings