Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g102610 Medicago truncatula HOM05D004670 ORTHO05D014137 4.4e-77 291.2 145 100.0
Medtr8g105355 Medicago truncatula HOM05D004670 ORTHO05D014137 9.2e-67 256.9 139 92.1
Medtr8g105450 Medicago truncatula HOM05D004670 ORTHO05D014137 4.6e-66 254.6 138 92.0
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 2.0e-45 186.0 136 72.1
TPR.G25089 Trifolium pratense HOM05D004670 ORTHO05D014137 9.3e-43 177.2 134 67.9
Medtr5g088900 Medicago truncatula HOM05D004670 ORTHO05D014137 3.5e-34 148.7 140 61.4
TPR.G17089 Trifolium pratense HOM05D004670 ORTHO05D014137 1.6e-31 139.8 103 69.9
Medtr8g080260 Medicago truncatula HOM05D004670 ORTHO05D014137 2.2e-28 129.4 137 56.9
TPR.G38069 Trifolium pratense HOM05D004670 ORTHO05D014137 4.9e-20 101.7 71 74.6
Ca_09603_v3 Cicer arietinum L. HOM05D004670 ORTHO05D014137 1.1e-16 90.5 82 58.5
TPR.G26507 Trifolium pratense HOM05D004670 ORTHO05D014137 1.1e-16 90.5 67 71.6
Medtr5g092030 Medicago truncatula HOM05D004670 ORTHO05D014137 9.7e-16 87.4 104 50.0
VMungo1080G1842 Vigna mungo HOM05D004670 ORTHO05D014137 7.2e-11 71.2 83 50.6
VMungo1215G2433 Vigna mungo HOM05D004670 ORTHO05D014137 2.1e-10 69.7 87 47.1
TPR.G1241 Trifolium pratense HOM05D004670 ORTHO05D014137 3.6e-10 68.9 56 69.6
SGA_v2.0_scaffold52G18920 Striga asiatica HOM05D004670 ORTHO05D008020 3.9e-09 65.5 117 39.3
AUR62000265 Chenopodium quinoa HOM05D004670 ORTHO05D008020 8.8e-09 64.3 83 48.2
PGR119G2157 Punica granatum HOM05D004670 ORTHO05D008020 5.3e-06 55.1 78 46.2


User provided reference genes

Program Settings