Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.0e-136 490.0 226 100.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.7e-113 412.1 219 84.5
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.9e-111 406.0 224 81.7
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 4.7e-110 401.4 224 81.2
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 7.5e-108 394.0 227 81.1
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.7e-107 392.9 218 82.1
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.2e-107 392.5 218 82.1
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 8.6e-96 354.0 224 72.3
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.1e-95 353.6 228 72.4
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.2e-94 350.1 220 71.8
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.6e-94 349.7 226 72.6
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 3.6e-94 348.6 224 71.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 6.2e-94 347.8 221 73.3
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.4e-93 346.7 226 71.2
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 5.2e-93 344.7 220 74.1
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.2e-93 344.7 226 67.7
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 8.9e-93 344.0 226 68.6
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.5e-92 343.2 218 71.1
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 7.6e-92 340.9 227 68.3
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 7.6e-92 340.9 223 69.1
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 9.9e-92 340.5 226 69.5
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.3e-91 340.1 217 73.3
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.9e-91 339.0 223 70.4
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.4e-91 337.8 221 68.3
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-90 337.0 183 83.6
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-90 337.0 183 83.6
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.9e-90 336.3 239 66.9
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.9e-90 336.3 223 71.3
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.9e-90 336.3 230 69.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 3.2e-90 335.5 219 67.6
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 4.1e-90 335.1 216 70.4
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 7.1e-90 334.3 225 65.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.1e-90 334.3 221 70.1
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.1e-90 334.3 221 70.1
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 9.2e-90 334.0 227 68.7
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.6e-89 333.2 219 70.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 2.1e-89 332.8 225 67.1
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.7e-89 332.4 228 66.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.5e-89 332.0 227 68.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 4.6e-89 331.6 219 67.6
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 6.0e-89 331.3 230 66.5
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 6.0e-89 331.3 230 69.1
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 7.8e-89 330.9 222 69.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.0e-88 330.5 219 67.1
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.0e-88 330.5 220 66.8
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 2.3e-88 329.3 229 66.4
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.6e-88 327.8 217 68.2
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 8.6e-88 327.4 219 68.9
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 3.3e-87 325.5 227 65.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.3e-87 325.5 226 66.4
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 7.3e-87 324.3 222 68.9
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 9.6e-87 323.9 217 66.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.1e-86 322.8 219 69.4
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 2.1e-86 322.8 225 65.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 6.2e-86 321.2 223 64.1
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 6.2e-86 321.2 225 65.8
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 8.1e-86 320.9 222 67.1
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.1e-86 320.9 220 68.2
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.1e-85 318.9 229 63.8
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 3.1e-85 318.9 229 63.8
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 4.0e-85 318.5 222 66.7
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 4.0e-85 318.5 219 66.7
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 8.9e-85 317.4 226 65.5
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 8.9e-85 317.4 219 66.7
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.2e-84 317.0 226 65.9
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.0e-84 316.2 215 66.0
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 5.8e-84 314.7 228 63.6
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 5.8e-84 314.7 262 57.6
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.3e-83 313.5 220 67.7
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.7e-83 313.2 229 64.6
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.7e-83 313.2 229 64.6
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.4e-82 309.3 225 68.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.2e-82 308.9 219 65.3
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 9.3e-82 307.4 230 64.3
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.3e-80 302.8 245 59.6
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.9e-80 302.0 192 69.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.5e-79 300.1 270 56.7
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 3.3e-79 298.9 235 59.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.3e-79 298.9 219 64.4
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 5.6e-79 298.1 220 59.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.8e-78 295.8 231 61.5
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 6.9e-77 291.2 201 67.7
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-76 290.0 198 68.7
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.5e-76 290.0 195 69.7
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.4e-76 288.5 198 68.2
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 4.4e-76 288.5 190 70.5
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 1.7e-75 286.6 223 60.1
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.6e-73 280.0 187 68.4
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.6e-73 280.0 188 69.1
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.1e-73 279.6 181 71.3
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 3.5e-73 278.9 206 65.0
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.3e-72 276.9 187 67.4
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.7e-72 276.6 194 70.6
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.3e-72 276.2 196 66.3
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 4.3e-71 271.9 186 66.7
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 7.3e-71 271.2 189 65.1
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 7.3e-71 271.2 189 66.7
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 9.6e-71 270.8 193 63.7
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 4.8e-70 268.5 220 61.4
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.4e-69 266.9 157 79.6
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 5.3e-69 265.0 187 62.0
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 6.9e-69 264.6 185 63.8
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.0e-68 263.1 185 64.9
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.2e-67 259.6 185 62.7
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 6.0e-65 251.5 141 82.3
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.3e-64 250.4 216 53.7
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.9e-64 248.8 227 55.1
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.9e-64 248.8 227 55.1
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.9e-64 248.8 200 63.0
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.2e-62 241.5 221 54.3
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.1e-61 240.7 221 52.5
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.6e-57 226.9 198 54.5
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.6e-49 200.3 220 43.2
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.9e-47 193.4 135 65.9
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.1e-37 161.0 78 83.3
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.7e-35 153.7 72 81.9
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.8e-16 90.5 189 33.9
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 4.0e-08 62.8 62 43.5
GSVIVG01018488001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.3e-06 57.8 39 64.1


User provided reference genes

Program Settings