Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 1.0e-254 882.9 440 100.0
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 5.7e-237 823.9 443 93.7
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 7.3e-224 780.4 437 89.9
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 3.3e-216 755.0 419 90.2
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 8.9e-214 746.9 454 83.9
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 2.4e-211 738.8 453 82.6
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 3.2e-211 738.4 453 83.2
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 6.0e-210 734.2 456 81.6
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 7.5e-205 717.2 451 82.3
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 1.5e-176 623.2 432 75.9
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 1.5e-176 623.2 467 69.6
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 2.1e-175 619.4 471 68.2
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.2e-173 613.6 465 69.9
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 2.6e-173 612.5 459 69.5
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 7.6e-173 610.9 475 68.0
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.3e-172 610.1 476 68.9
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 1.1e-171 607.1 467 70.2
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 1.3e-169 600.1 461 68.1
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 3.9e-169 598.6 472 67.2
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 3.3e-168 595.5 448 67.6
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 5.6e-168 594.7 439 69.7
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 7.4e-168 594.3 466 68.9
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 7.4e-168 594.3 478 66.9
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.3e-167 593.6 461 68.3
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 2.1e-167 592.8 485 64.9
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 3.7e-167 592.0 461 67.7
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 8.2e-167 590.9 461 67.2
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 1.1e-166 590.5 452 68.1
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 4.5e-165 585.1 438 68.0
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 5.8e-165 584.7 489 65.8
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 7.6e-165 584.3 465 67.3
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.0e-164 583.9 451 68.7
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 6.5e-164 581.3 471 65.2
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 4.2e-163 578.6 459 67.1
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 7.9e-162 574.3 422 70.1
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 1.5e-160 570.1 437 68.4
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 2.5e-160 569.3 448 66.5
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 5.7e-160 568.2 334 80.8
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 2.2e-159 566.2 468 66.5
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 3.1e-158 562.4 388 71.6
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 4.5e-157 558.5 406 69.0
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 2.9e-156 555.8 389 74.0
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 6.5e-156 554.7 465 64.7
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.1e-155 553.9 448 63.4
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 1.4e-155 553.5 453 63.6
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 4.2e-155 552.0 449 65.0
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 1.8e-153 546.6 489 60.7
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 9.7e-152 540.8 415 69.4
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 9.7e-152 540.8 446 65.2
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 2.8e-151 539.3 458 61.1
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 8.2e-151 537.7 461 61.4
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.5e-149 533.5 536 57.6
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 7.7e-149 531.2 416 68.5
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 3.8e-148 528.9 429 68.3
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 1.4e-147 526.9 440 60.9
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 1.2e-146 523.9 517 57.1
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 4.4e-144 515.4 451 63.4
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 2.0e-141 506.5 561 55.1
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.8e-135 486.1 414 63.3
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 1.1e-134 484.2 392 64.3
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 2.5e-131 473.0 244 93.4
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 5.7e-128 461.8 436 57.8
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.5e-123 447.2 462 56.5
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 1.6e-117 427.2 458 48.9
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 5.0e-116 422.2 474 54.9
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.6e-114 417.2 498 52.4
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.1e-114 416.8 498 52.4
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 5.7e-112 408.7 462 53.0
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 5.4e-110 402.1 340 64.4
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.9e-108 396.0 469 51.6
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.0e-105 387.9 335 65.1
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.4e-105 387.5 333 64.9
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.2e-104 384.4 428 48.6
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.0e-100 369.8 523 46.5
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 2.0e-96 357.1 473 48.6
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 6.4e-95 352.1 258 70.2
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 9.6e-83 311.6 265 58.5
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 9.9e-80 301.6 258 64.7
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 3.8e-79 299.7 298 58.7
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.2e-77 294.7 444 41.0
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 4.3e-75 286.2 168 81.5
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 2.7e-69 266.9 275 55.6
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 2.5e-67 260.4 152 82.2
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 2.5e-67 260.4 343 42.6
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.5e-67 260.4 274 58.8
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.6e-66 256.5 273 59.0
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 5.8e-64 249.2 249 57.4
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 1.7e-63 247.7 131 92.4
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 9.6e-59 231.9 244 55.3
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.8e-57 227.6 115 93.0
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 3.5e-53 213.4 102 99.0
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 6.7e-52 209.1 100 99.0
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 1.6e-37 161.4 101 78.2
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 5.1e-36 156.4 90 81.1
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 5.1e-36 156.4 359 32.0
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 1.8e-25 121.3 309 31.1
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.6e-24 118.2 77 70.1
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-22 112.1 67 79.1
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.9e-22 111.3 68 73.5
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.0e-20 105.5 65 76.9
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 1.1e-19 102.1 175 42.9
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 2.3e-12 77.8 60 63.3
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 8.8e-12 75.9 258 23.3
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 2.4e-09 67.8 210 31.4
RcHm_v2.0_Chr7g0190461 Rosa chinensis HOM05D002332 ORTHO05D002509 7.0e-09 66.2 202 28.2
Medtr1g034785 Medicago truncatula HOM05D002332 ORTHO05D002509 4.5e-08 63.5 166 24.7
Haze_07236 Corylus avellana HOM05D002332 ORTHO05D002509 7.7e-08 62.8 201 25.9
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 7.7e-08 62.8 205 24.9
Cfa018082 Carpinus fangiana HOM05D002332 ORTHO05D002509 1.0e-07 62.4 194 23.7
FAN08G0156 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.0e-07 62.4 202 27.7
Aa31LG10G9730 Aethionema arabicum HOM05D002332 ORTHO05D002509 1.3e-07 62.0 170 23.5
C05p13900 Brassica napus HOM05D002332 ORTHO05D002509 1.3e-07 62.0 162 29.0
Ca_12501_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 2.9e-07 60.8 202 24.3
Ca_25727_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 2.9e-07 60.8 202 24.3
Haze_18030 Corylus avellana HOM05D002332 ORTHO05D002509 2.9e-07 60.8 170 22.9
Cfa018843 Carpinus fangiana HOM05D002332 ORTHO05D002509 3.8e-07 60.5 201 25.9
Duzib084G0667 Durio zibethinus HOM05D002332 ORTHO05D002509 3.8e-07 60.5 203 25.1
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 3.8e-07 60.5 365 20.8
TPR.G22366 Trifolium pratense HOM05D002332 ORTHO05D002509 3.8e-07 60.5 167 24.0
BolC8t50036H Brassica oleracea HOM05D002332 ORTHO05D002509 5.0e-07 60.1 210 23.8
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 5.0e-07 60.1 228 23.7
Aa31LG8G4250 Aethionema arabicum HOM05D002332 ORTHO05D002509 6.5e-07 59.7 168 22.6
GSVIVG01008513001 Vitis vinifera HOM05D002332 ORTHO05D002509 6.5e-07 59.7 199 24.6
A01p24930 Brassica napus HOM05D002332 ORTHO05D002509 8.5e-07 59.3 215 23.7
C08p24150 Brassica napus HOM05D002332 ORTHO05D002509 8.5e-07 59.3 210 24.3
BcaC07g39390 Brassica carinata HOM05D002332 ORTHO05D002509 1.1e-06 58.9 210 24.3
BraA01t02404Z Brassica rapa HOM05D002332 ORTHO05D002509 1.1e-06 58.9 215 23.7
Glyma.18G275100 Glycine max HOM05D002332 ORTHO05D002509 1.1e-06 58.9 165 24.2
Dinv01308 Davidia involucrata HOM05D002332 ORTHO05D002509 1.5e-06 58.5 174 27.0
CiPaw.05G179300 Carya illinoinensis HOM05D002332 ORTHO05D002509 1.9e-06 58.2 167 23.4
FvH4_5g07940 Fragaria vesca HOM05D002332 ORTHO05D002509 1.9e-06 58.2 207 26.1
FAN18G1292 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.9e-06 58.2 207 26.1
Gohir.D03G113300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 1.9e-06 58.2 261 23.4
Gorai.003G119500 Gossypium raimondii HOM05D002332 ORTHO05D002509 1.9e-06 58.2 204 24.0
QL10p004201 Quercus lobata HOM05D002332 ORTHO05D002509 1.9e-06 58.2 168 26.8
TAR629G2976 Trochodendron aralioides HOM05D002332 ORTHO05D002509 1.9e-06 58.2 170 25.3
BcaB05g22960 Brassica carinata HOM05D002332 ORTHO05D002509 2.5e-06 57.8 220 23.6
QL06p040017 Quercus lobata HOM05D002634 ORTHO05D003100 2.5e-06 57.8 327 20.8
Solyc12g009030.2 Solanum lycopersicum HOM05D005151 ORTHO05D006322 2.5e-06 57.8 310 22.6
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 2.5e-06 57.8 203 24.1
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 3.2e-06 57.4 39 74.4
VMungo1383G1987 Vigna mungo HOM05D002332 ORTHO05D002509 3.2e-06 57.4 167 22.2
Dinv36800 Davidia involucrata HOM05D005151 ORTHO05D006322 4.2e-06 57.0 218 22.0
Gohir.A03G053700 Gossypium hirsutum HOM05D002332 ORTHO05D002509 4.2e-06 57.0 201 23.9
CSS0008874 Camellia sinensis var. sinensis HOM05D005151 ORTHO05D006322 5.5e-06 56.6 222 24.8
Lj1g0004747 Lotus japonicus HOM05D002332 ORTHO05D002509 5.5e-06 56.6 172 25.6
CiPaw.11G009200 Carya illinoinensis HOM05D002332 ORTHO05D002509 7.2e-06 56.2 167 27.5
RcHm_v2.0_Chr6g0308111 Rosa chinensis HOM05D002332 ORTHO05D002509 7.2e-06 56.2 169 24.3
BcaB01g00739 Brassica carinata HOM05D002332 ORTHO05D002509 9.4e-06 55.8 174 24.1
Glyma.08G252500 Glycine max HOM05D002332 ORTHO05D002509 9.4e-06 55.8 165 23.0


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