Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 1.6e-72 276.6 212 100.0
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 1.1e-55 220.7 219 69.9
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 1.9e-52 209.9 217 66.4
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.6e-43 180.3 212 56.6
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 4.7e-43 178.7 213 68.1
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 1.4e-39 167.2 217 53.9
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.0e-38 163.3 216 53.2
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.6e-35 153.7 212 51.4
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 2.7e-35 152.9 210 47.6
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 2.3e-34 149.8 214 44.9
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 4.4e-33 145.6 212 51.9
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 7.0e-31 138.3 211 48.3
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 7.0e-31 138.3 214 44.4
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.9e-29 132.9 209 42.1
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 2.9e-29 132.9 213 55.4
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 4.2e-28 129.0 207 51.7
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 3.6e-27 125.9 203 43.3
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 4.0e-26 122.5 213 40.8
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-25 120.9 213 39.9
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 2.0e-25 120.2 192 42.2
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 4.4e-25 119.0 211 40.8
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 9.8e-25 117.9 199 41.2
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.2e-24 116.7 194 62.4
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.8e-24 116.3 194 64.4
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 6.3e-24 115.2 185 65.9
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.8e-23 113.6 211 37.4
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 9.1e-23 111.3 212 35.4
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.7e-22 108.2 158 44.9
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.7e-22 108.2 202 39.1
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 5.0e-21 105.5 202 38.6
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.5e-20 104.0 211 39.8
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.9e-20 103.6 146 45.2
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 9.4e-20 101.3 200 45.0
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.2e-19 100.9 200 46.0
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.2e-19 100.9 200 46.0
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.2e-19 100.9 191 36.6
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 1.0e-18 97.8 194 42.8
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 5.2e-18 95.5 216 38.0
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 5.7e-17 92.0 215 38.6
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 1.7e-16 90.5 192 34.4
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 2.2e-16 90.1 180 37.8
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 6.3e-16 88.6 173 34.7
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 8.3e-16 88.2 87 60.9
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.1e-15 87.8 203 35.5
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.1e-15 87.8 197 35.5
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 1.8e-15 87.0 206 37.9
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 1.8e-15 87.0 170 36.5
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.8e-15 87.0 166 34.9
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 2.4e-15 86.7 188 35.6
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 5.4e-15 85.5 192 33.3
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 1.6e-14 84.0 203 30.5
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 2.0e-14 83.6 180 33.9
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.7e-14 83.2 196 39.3
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 4.5e-14 82.4 171 33.3
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 7.7e-14 81.6 171 36.3
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 2.9e-13 79.7 198 30.8
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 2.9e-13 79.7 182 35.2
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 5.0e-13 79.0 181 35.4
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 5.0e-13 79.0 215 31.6
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 6.6e-13 78.6 181 33.1
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 6.6e-13 78.6 193 36.3
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 8.6e-13 78.2 146 32.2
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 8.6e-13 78.2 200 33.5
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 8.6e-13 78.2 208 32.7
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 8.6e-13 78.2 209 35.4
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 1.1e-12 77.8 186 34.9
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 1.1e-12 77.8 175 35.4
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.1e-12 77.8 186 34.9
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 1.1e-12 77.8 188 44.1
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 5.6e-12 75.5 180 34.4
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 5.6e-12 75.5 179 33.5
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.6e-11 73.9 184 31.5
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.1e-11 73.6 156 34.0
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 2.8e-11 73.2 184 36.4
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 3.6e-11 72.8 207 30.9
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 6.1e-11 72.0 192 32.8
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 8.0e-11 71.6 185 35.1
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 8.0e-11 71.6 163 33.1
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.8e-10 70.5 191 29.8
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 2.3e-10 70.1 179 31.3
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 2.3e-10 70.1 179 31.3
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 3.0e-10 69.7 190 33.2
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 5.2e-10 68.9 162 29.6
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 6.8e-10 68.6 89 51.7
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 8.9e-10 68.2 162 30.2
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 8.9e-10 68.2 175 30.9
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 8.9e-10 68.2 169 30.2
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 1.2e-09 67.8 183 31.7
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 1.2e-09 67.8 183 31.7
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 1.2e-09 67.8 183 31.7
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 1.5e-09 67.4 213 34.7
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.6e-09 66.6 203 31.5
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 3.4e-09 66.2 202 29.7
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 3.4e-09 66.2 173 32.9
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 3.4e-09 66.2 196 30.6
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 3.4e-09 66.2 212 34.0
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 4.4e-09 65.9 190 28.9
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 5.7e-09 65.5 194 29.4
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 9.8e-09 64.7 178 47.8
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 9.8e-09 64.7 190 32.1
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 9.8e-09 64.7 151 37.1
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 1.7e-08 63.9 212 31.1
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 4.9e-08 62.4 190 30.0
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 4.9e-08 62.4 195 30.3
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 6.4e-08 62.0 156 30.8
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 6.4e-08 62.0 180 29.4
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 8.3e-08 61.6 141 27.7
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 1.1e-07 61.2 64 57.8
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.1e-07 61.2 141 27.7
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 1.4e-07 60.8 179 29.6
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 1.4e-07 60.8 179 29.6
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 3.2e-07 59.7 153 30.1
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 7.0e-07 58.5 183 30.6
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.6e-06 57.4 141 29.1
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 2.7e-06 56.6 177 34.5
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 4.6e-06 55.8 190 35.3
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 4.6e-06 55.8 190 37.9
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 5.9e-06 55.5 181 27.1
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 7.8e-06 55.1 184 29.9
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 7.8e-06 55.1 41 61.0


User provided reference genes

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