Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g096250 Medicago truncatula HOM05D000797 ORTHO05D261076 1.3e-46 189.5 103 100.0
Medtr1g096240 Medicago truncatula HOM05D000797 ORTHO05D002835 7.6e-15 84.0 68 73.5
Psat0s2229g0080 Pisum sativum HOM05D000797 ORTHO05D002835 4.6e-12 74.7 72 68.1
Ca_10608_v3 Cicer arietinum L. HOM05D000797 ORTHO05D002835 1.3e-11 73.2 72 65.3
Glyma.10G215400 Glycine max HOM05D000797 ORTHO05D002835 8.7e-11 70.5 69 65.2
Phvul.007G090300 Phaseolus vulgaris HOM05D000797 ORTHO05D002835 1.3e-09 66.6 70 64.3
VMungo0720G0340 Vigna mungo HOM05D000797 ORTHO05D002835 2.8e-09 65.5 70 64.3
AT1G34430 Arabidopsis thaliana HOM05D000797 ORTHO05D002835 3.6e-09 65.1 68 63.2
Glyma.20G176300 Glycine max HOM05D000797 ORTHO05D002835 3.6e-09 65.1 70 62.9
Lj5g0003373 Lotus japonicus HOM05D000797 ORTHO05D002835 3.6e-09 65.1 73 60.3
AL1G48990 Arabidopsis lyrata HOM05D000797 ORTHO05D002835 1.8e-08 62.8 68 61.8
CiPaw.16G062300 Carya illinoinensis HOM05D000797 ORTHO05D002835 5.3e-08 61.2 71 57.7
CARHR033860 Cardamine hirsuta HOM05D000797 ORTHO05D002835 6.9e-08 60.8 69 60.9
Carub.0001s3256 Capsella rubella HOM05D000797 ORTHO05D002835 1.5e-07 59.7 69 62.3
Lalb_Chr02g0141851 Lupinus albus HOM05D000797 ORTHO05D002835 1.5e-07 59.7 70 57.1
Atru.chr13.1803 Acer truncatum HOM05D000797 ORTHO05D002835 2.0e-07 59.3 69 58.0
HanXRQChr04g0107421 Helianthus annuus HOM05D000797 ORTHO05D002835 2.0e-07 59.3 73 56.2
Cfa018197 Carpinus fangiana HOM05D000797 ORTHO05D002835 4.5e-07 58.2 70 60.0
Prupe.8G056000 Prunus persica HOM05D000797 ORTHO05D002835 5.8e-07 57.8 72 56.9
Atru.chr13.1822 Acer truncatum HOM05D000797 ORTHO05D002835 7.6e-07 57.4 71 56.3
Duzib177G0720 Durio zibethinus HOM05D000797 ORTHO05D002835 7.6e-07 57.4 76 52.6
Gohir.A05G250900 Gossypium hirsutum HOM05D000797 ORTHO05D002835 7.6e-07 57.4 70 58.6
Gohir.D05G252900 Gossypium hirsutum HOM05D000797 ORTHO05D002835 7.6e-07 57.4 70 58.6
Gorai.009G264100 Gossypium raimondii HOM05D000797 ORTHO05D002835 7.6e-07 57.4 70 58.6
TWI34G0369 Tripterygium wilfordii HOM05D000797 ORTHO05D002835 7.6e-07 57.4 74 54.1
FAN27G1539 Fragaria x ananassa HOM05D000797 ORTHO05D002835 9.9e-07 57.0 68 55.9
Lsat_1_v5_gn_1_10500 Lactuca sativa HOM05D000797 ORTHO05D002835 9.9e-07 57.0 72 59.7
Cpa.g.sc66.53 Carica papaya HOM05D000797 ORTHO05D002835 1.3e-06 56.6 71 56.3
PGR102G0070 Punica granatum HOM05D000797 ORTHO05D002835 1.3e-06 56.6 71 57.7
Thecc.08G181400 Theobroma cacao HOM05D000797 ORTHO05D002835 1.3e-06 56.6 75 53.3
CSS0045279 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D002835 1.7e-06 56.2 70 58.6
Haze_17916 Corylus avellana HOM05D000797 ORTHO05D002835 1.7e-06 56.2 70 55.7
Thhalv10007561m.g Eutrema salsugineum HOM05D000797 ORTHO05D002835 1.7e-06 56.2 71 53.5
Sp1g29620 Schrenkiella parvula HOM05D000797 ORTHO05D002835 1.7e-06 56.2 75 58.7
BraA09t38743Z Brassica rapa HOM05D000797 ORTHO05D002835 2.2e-06 55.8 68 60.3
MD05G1040900 Malus domestica HOM05D000797 ORTHO05D002835 2.2e-06 55.8 75 54.7
Sabra13G0096700 Salix brachista HOM05D000797 ORTHO05D002835 2.2e-06 55.8 73 52.1
Actinidia02582 Actinidia chinensis HOM05D000797 ORTHO05D002835 2.9e-06 55.5 72 51.4
vmacro00776 Vaccinium macrocarpon HOM05D000797 ORTHO05D002835 2.9e-06 55.5 71 52.1
Dinv41691 Davidia involucrata HOM05D000797 ORTHO05D002835 3.8e-06 55.1 77 51.9
Dinv08019 Davidia involucrata HOM05D000797 ORTHO05D002835 4.9e-06 54.7 76 53.9
arahy.Tifrunner.gnm1.ann1.L5V71U Arachis hypogaea HOM05D000797 ORTHO05D002835 6.4e-06 54.3 73 54.8
Sed0006406 Sechium edule HOM05D000797 ORTHO05D002835 6.4e-06 54.3 74 52.7
BcaC08g43774 Brassica carinata HOM05D000797 ORTHO05D002835 8.4e-06 53.9 71 56.3
BolC6t36283H Brassica oleracea HOM05D000797 ORTHO05D002835 8.4e-06 53.9 71 56.3
MD10G1046900 Malus domestica HOM05D000797 ORTHO05D002835 8.4e-06 53.9 74 51.4
Manes.02G190800 Manihot esculenta HOM05D000797 ORTHO05D002835 8.4e-06 53.9 73 56.2
Rhsim11G0060300 Rhododendron simsii HOM05D000797 ORTHO05D002835 8.4e-06 53.9 70 51.4
RhsimUnG0069800 Rhododendron simsii HOM05D000797 ORTHO05D002835 8.4e-06 53.9 70 51.4


User provided reference genes

Program Settings