Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 5.7e-36 153.7 75 100.0
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.6e-30 135.6 74 90.5
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.7e-27 125.6 74 82.4
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 3.7e-27 124.4 72 81.9
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.2e-25 119.4 72 77.8
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.0e-25 118.6 71 76.1
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.5e-25 117.9 69 78.3
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 3.5e-25 117.9 69 78.3
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.5e-25 117.9 64 87.5
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 4.5e-25 117.5 67 83.6
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 5.9e-25 117.1 71 77.5
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 5.9e-25 117.1 71 76.1
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 5.9e-25 117.1 71 76.1
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 5.9e-25 117.1 71 76.1
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.0e-24 116.3 69 78.3
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.3e-24 115.9 67 82.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.3e-24 115.9 69 76.8
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.3e-24 115.9 69 75.4
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.7e-24 115.5 71 74.6
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.2e-24 115.2 71 73.2
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.2e-24 115.2 71 73.2
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 2.2e-24 115.2 71 73.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.9e-24 114.8 64 82.8
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.9e-24 114.8 71 74.6
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 2.9e-24 114.8 71 73.2
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 3.8e-24 114.4 71 74.6
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 3.8e-24 114.4 71 70.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.8e-24 114.4 71 73.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.8e-24 114.4 71 73.2
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 3.8e-24 114.4 64 82.8
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.8e-24 114.4 65 81.5
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 6.5e-24 113.6 71 76.1
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 6.5e-24 113.6 71 71.8
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 6.5e-24 113.6 71 73.2
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 8.5e-24 113.2 69 76.8
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 8.5e-24 113.2 69 73.9
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.1e-23 112.8 71 76.1
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.1e-23 112.8 71 71.8
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-23 112.8 64 81.2
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-23 112.8 64 81.2
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.1e-23 112.8 64 81.2
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.1e-23 112.8 73 72.6
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.1e-23 112.8 65 81.5
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.4e-23 112.5 71 76.1
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.4e-23 112.5 71 71.8
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.9e-23 112.1 69 72.5
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.9e-23 112.1 66 75.8
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.9e-23 112.1 64 81.2
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.9e-23 112.1 64 81.2
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.5e-23 111.7 71 70.4
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.5e-23 111.7 69 72.5
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.2e-23 111.3 69 76.8
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 3.2e-23 111.3 71 70.4
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.2e-23 111.3 71 74.6
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 4.2e-23 110.9 69 71.0
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 4.2e-23 110.9 71 69.0
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 4.2e-23 110.9 64 79.7
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 7.2e-23 110.2 64 78.1
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 7.2e-23 110.2 66 74.2
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 9.4e-23 109.8 66 77.3
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.2e-22 109.4 71 69.0
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.6e-22 109.0 64 76.6
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.6e-22 109.0 69 72.5
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.1e-22 108.6 66 75.8
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.1e-22 108.6 63 74.6
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 2.1e-22 108.6 64 75.0
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.1e-22 108.6 66 75.8
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 2.1e-22 108.6 69 71.0
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.1e-22 108.6 71 69.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.7e-22 108.2 63 79.4
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.7e-22 108.2 71 69.0
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 4.7e-22 107.5 71 69.0
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 75.8
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 75.8
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 75.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 75.8
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 75.8
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 74.2
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 6.1e-22 107.1 66 74.2
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.1e-22 107.1 65 72.3
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 6.1e-22 107.1 69 69.6
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 6.1e-22 107.1 69 68.1
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 8.0e-22 106.7 71 69.0
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.0e-21 106.3 99 57.6
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.0e-21 106.3 67 74.6
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.4e-21 105.9 66 74.2
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 1.4e-21 105.9 64 73.4
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.8e-21 105.5 64 73.4
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.3e-21 105.1 66 74.2
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.3e-21 105.1 64 73.4
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.7e-21 103.6 66 75.8
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 6.7e-21 103.6 71 69.0
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 8.8e-21 103.2 70 67.1
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.1e-20 102.8 69 71.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.3e-20 101.3 69 68.1
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 5.7e-20 100.5 66 69.7
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 7.4e-20 100.1 63 68.3
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 7.4e-20 100.1 71 63.4
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 9.7e-20 99.8 70 65.7
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 2.8e-19 98.2 71 62.0
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.7e-19 97.8 71 66.2
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 4.8e-19 97.4 61 72.1
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 6.3e-19 97.1 62 72.6
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 8.2e-19 96.7 64 68.8
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 8.2e-19 96.7 65 66.2
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.3e-18 94.0 60 75.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 7.0e-18 93.6 64 73.4
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 7.0e-18 93.6 64 62.5
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 2.5e-15 85.1 48 85.4
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 5.5e-15 84.0 65 60.0
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 9.4e-15 83.2 57 68.4
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 8.8e-13 76.6 66 54.5
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 8.8e-13 76.6 44 79.5
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.5e-12 75.9 48 75.0
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.4e-12 74.7 71 53.5
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 4.4e-12 74.3 48 72.9
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.8e-11 71.6 72 45.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.7e-09 65.1 63 41.3
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 6.5e-08 60.5 67 44.8
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.5e-07 58.5 63 34.9
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 5.5e-07 57.4 37 62.2
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 4.7e-06 54.3 75 37.3


User provided reference genes

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