Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g094770 Medicago truncatula HOM05D000096 ORTHO05D000045 3.7e-24 114.0 56 100.0
Medtr4g134740 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-13 78.6 68 60.3
Medtr7g060880 Medicago truncatula HOM05D000096 ORTHO05D000045 9.5e-12 72.8 91 48.4
Medtr1g018670 Medicago truncatula HOM05D000096 ORTHO05D000045 1.2e-11 72.4 65 58.5
Medtr6g018340 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-11 71.6 68 57.4
Medtr3g048960 Medicago truncatula HOM05D000096 ORTHO05D000045 2.8e-11 71.2 64 60.9
Medtr1g101230 Medicago truncatula HOM05D000096 ORTHO05D000045 2.3e-10 68.2 64 59.4
Medtr6g027930 Medicago truncatula HOM05D000096 ORTHO05D000045 2.3e-10 68.2 65 60.0
Medtr2g016390 Medicago truncatula HOM05D000096 ORTHO05D000045 5.2e-10 67.0 53 67.9
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-09 65.9 70 50.0
Medtr2g008505 Medicago truncatula HOM05D000096 ORTHO05D000045 1.5e-09 65.5 64 56.2
Medtr8g057880 Medicago truncatula HOM05D000096 ORTHO05D000045 1.5e-09 65.5 61 59.0
Medtr5g087830 Medicago truncatula HOM05D000096 ORTHO05D000045 4.4e-09 63.9 64 53.1
Medtr5g034510 Medicago truncatula HOM05D000096 ORTHO05D000045 7.5e-09 63.2 56 60.7
Medtr3g451160 Medicago truncatula HOM05D000096 ORTHO05D000045 1.3e-08 62.4 61 52.5
Medtr3g452260 Medicago truncatula HOM05D000096 ORTHO05D000045 1.3e-08 62.4 61 52.5
Medtr1g086460 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-08 62.0 49 61.2
Lj2g0014783 Lotus japonicus HOM05D000096 ORTHO05D000045 2.9e-08 61.2 68 47.1
Medtr8g072100 Medicago truncatula HOM05D000096 ORTHO05D000045 3.7e-08 60.8 63 54.0
Glyma.07G171700 Glycine max HOM05D000096 ORTHO05D000045 8.3e-08 59.7 68 47.1
TPR.G20041 Trifolium pratense HOM05D000096 ORTHO05D000045 1.9e-07 58.5 64 51.6
Glyma.01G135100 Glycine max HOM05D000096 ORTHO05D000045 2.4e-07 58.2 68 45.6
Glyma.12G111300 Glycine max HOM05D000096 ORTHO05D000045 2.4e-07 58.2 68 45.6
Medtr1g098830 Medicago truncatula HOM05D000096 ORTHO05D000045 2.4e-07 58.2 60 58.3
C09p36920 Brassica napus HOM05D000096 ORTHO05D000174 3.2e-07 57.8 68 47.1
BolC9t56522H Brassica oleracea HOM05D000096 ORTHO05D000174 3.2e-07 57.8 68 47.1
TWI09G0899 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.2e-07 57.8 70 47.1
CARHR181300 Cardamine hirsuta HOM05D000096 ORTHO05D000045 4.1e-07 57.4 68 48.5
Lj4g0022780 Lotus japonicus HOM05D000096 ORTHO05D000045 4.1e-07 57.4 68 45.6
Lj3g0024542 Lotus japonicus HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 47.1
LjContig00094g0010721 Lotus japonicus HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 47.1
LjContig00096g0004252 Lotus japonicus HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 47.1
LjContig00141g0026560 Lotus japonicus HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 48.5
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 48.5
TPR.G8851 Trifolium pratense HOM05D000096 ORTHO05D000045 5.4e-07 57.0 68 44.1
Aqoxy2G01285 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 7.0e-07 56.6 68 44.1
CANSAT01G2094 Cannabis sativa HOM05D000096 ORTHO05D000045 7.0e-07 56.6 68 42.6
CANSAT01G2512 Cannabis sativa HOM05D000096 ORTHO05D000045 7.0e-07 56.6 68 42.6
CANSAT35G1513 Cannabis sativa HOM05D000096 ORTHO05D000045 7.0e-07 56.6 68 42.6
Ciclev10033312m.g Citrus clementina HOM05D000096 ORTHO05D000045 7.0e-07 56.6 68 44.1
TPR.G21151 Trifolium pratense HOM05D000096 ORTHO05D000045 9.2e-07 56.2 68 45.6
TWI31G0491 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 9.2e-07 56.2 65 47.7
C07p00750 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-06 55.8 68 45.6
Ciclev10033686m.g Citrus clementina HOM05D000096 ORTHO05D000045 1.2e-06 55.8 68 42.6
Aqoxy2G01909 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.6e-06 55.5 68 42.6
TPR.G20355 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-06 55.5 68 45.6
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-06 55.1 68 45.6
Hma1.2p1_0099F.1_g048480 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.1e-06 55.1 68 42.6
Lj6g0026524 Lotus japonicus HOM05D000096 ORTHO05D000045 2.1e-06 55.1 68 42.6
Medtr2g047000 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-06 55.1 54 55.6
Medtr3g010480 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-06 55.1 56 55.4
CARHR038360 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.7e-06 54.7 68 47.1
CARHR218770 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.7e-06 54.7 68 44.1
CARHR286450 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.7e-06 54.7 68 48.5
Ciclev10003437m.g Citrus clementina HOM05D000096 ORTHO05D000045 2.7e-06 54.7 68 42.6
Lj1g0008627 Lotus japonicus HOM05D000096 ORTHO05D000045 2.7e-06 54.7 68 42.6
Medtr1g016610 Medicago truncatula HOM05D000096 ORTHO05D000045 2.7e-06 54.7 54 48.1
ECA232G2437 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.5e-06 54.3 68 44.1
RcHm_v2.0_Chr5g0066561 Rosa chinensis HOM05D000096 ORTHO05D000045 3.5e-06 54.3 68 42.6
TPR.G1822 Trifolium pratense HOM05D000096 ORTHO05D000045 3.5e-06 54.3 68 44.1
C03p65010 Brassica napus HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 42.6
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 42.6
CARHR104250 Cardamine hirsuta HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 45.6
COL.COLO4_09220 Corchorus olitorius HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 42.6
HanXRQChr16g0520611 Helianthus annuus HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 42.6
Lj1g0025291 Lotus japonicus HOM05D000096 ORTHO05D000045 4.6e-06 53.9 68 48.5
Medtr3g032450 Medicago truncatula HOM05D000096 ORTHO05D000045 4.6e-06 53.9 51 54.9
Medtr4g030760 Medicago truncatula HOM05D000007 ORTHO05D000017 4.6e-06 53.9 67 49.3
PGSC0003DMG400005510 Solanum tuberosum HOM05D000096 ORTHO05D000045 4.6e-06 53.9 65 47.7
CARHR258310 Cardamine hirsuta HOM05D000096 ORTHO05D000045 7.8e-06 53.1 68 44.1
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.8e-06 53.1 68 45.6
Medtr2g097380 Medicago truncatula HOM05D000511 ORTHO05D000413 7.8e-06 53.1 46 58.7
TPR.G27355 Trifolium pratense HOM05D000096 ORTHO05D000045 7.8e-06 53.1 68 42.6


User provided reference genes

Program Settings