Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g091013 Medicago truncatula HOM05D000045 ORTHO05D000611 1.4e-33 145.6 70 100.0
TPR.G25040 Trifolium pratense HOM05D000045 ORTHO05D000611 1.5e-14 82.4 56 71.4
TPR.G16952 Trifolium pratense HOM05D000045 ORTHO05D000067 2.6e-14 81.6 56 69.6
TPR.G1463 Trifolium pratense HOM05D000045 ORTHO05D000067 1.7e-13 79.0 56 67.9
TPR.G28057 Trifolium pratense HOM05D000045 ORTHO05D000067 1.6e-11 72.4 78 50.0
Medtr5g015480 Medicago truncatula HOM05D000045 ORTHO05D000611 2.0e-11 72.0 56 62.5
Medtr6g017200 Medicago truncatula HOM05D000045 ORTHO05D000611 2.0e-11 72.0 78 51.3
TPR.G7930 Trifolium pratense HOM05D000045 ORTHO05D000611 2.0e-11 72.0 69 53.6
Ca_05742_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000611 3.5e-11 71.2 56 64.3
Medtr0402s0040 Medicago truncatula HOM05D000045 ORTHO05D000611 5.9e-11 70.5 78 51.3
Medtr1g057920 Medicago truncatula HOM05D000045 ORTHO05D000611 7.7e-11 70.1 77 49.4
TPR.G40442 Trifolium pratense HOM05D000045 ORTHO05D000067 7.7e-11 70.1 53 64.2
TPR.G18125 Trifolium pratense HOM05D000045 ORTHO05D000067 2.2e-10 68.6 75 50.7
Ah.01g014940 Amaranthus hybridus HOM05D000045 ORTHO05D000611 3.8e-10 67.8 56 60.7
Medtr2g070590 Medicago truncatula HOM05D000045 ORTHO05D000611 3.2e-09 64.7 78 47.4
Psat5g221600 Pisum sativum HOM05D000045 ORTHO05D000067 3.2e-09 64.7 55 58.2
CSS0000341 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.4e-09 63.2 56 53.6
CSS0004211 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.4e-09 63.2 56 53.6
CSS0014838 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.4e-09 63.2 56 53.6
Ah.11g042870 Amaranthus hybridus HOM05D000045 ORTHO05D000611 1.2e-08 62.8 56 55.4
EL10Ac7g17614 Beta vulgaris HOM05D000045 ORTHO05D000611 1.2e-08 62.8 54 55.6
CSS0042373 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-08 62.0 56 51.8
CSS0003195 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-08 61.6 56 51.8
CSS0025579 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-08 61.6 56 51.8
CSS0041653 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-08 61.6 56 51.8
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-08 61.2 55 60.0
Medtr0137s0040 Medicago truncatula HOM05D000045 ORTHO05D000611 3.6e-08 61.2 56 53.6
QL04p026370 Quercus lobata HOM05D000045 ORTHO05D000611 4.7e-08 60.8 56 53.6
CSS0023299 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.1e-08 60.5 56 50.0
CSS0047126 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.1e-08 60.5 56 50.0
CSS0005964 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 59.3 56 50.0
COL.COLO4_04687 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.8e-07 58.9 56 53.6
COL.COLO4_12964 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.8e-07 58.9 56 53.6
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.8e-07 58.9 56 53.6
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-07 58.5 55 58.2
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-07 58.5 55 58.2
Ca_12897_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000611 2.3e-07 58.5 38 71.1
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-07 58.2 52 51.9
COL.COLO4_25082 Corchorus olitorius HOM05D000045 ORTHO05D004773 4.0e-07 57.8 56 50.0
Actinidia02450 Actinidia chinensis HOM05D000045 ORTHO05D000067 5.2e-07 57.4 55 54.5
Rhsim10G0174800 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.2e-07 57.4 55 43.6
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-06 56.2 56 51.8
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-06 56.2 56 51.8
CAN.G3.15 Capsicum annuum HOM05D000045 ORTHO05D000611 1.5e-06 55.8 54 48.1
CAN.G1195.7 Capsicum annuum HOM05D000045 ORTHO05D000611 2.6e-06 55.1 54 48.1
EL10Ac6g13904 Beta vulgaris HOM05D000045 ORTHO05D000611 3.3e-06 54.7 54 50.0
QL03p055126 Quercus lobata HOM05D000045 ORTHO05D000611 4.4e-06 54.3 53 50.9
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 5.7e-06 53.9 54 48.1
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.5e-06 53.5 56 50.0
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.5e-06 53.5 56 50.0
TPR.G5900 Trifolium pratense HOM05D000045 ORTHO05D000611 7.5e-06 53.5 45 60.0
EL10Ac9g20884 Beta vulgaris HOM05D000045 ORTHO05D004773 9.7e-06 53.1 47 53.2
COL.COLO4_20854 Corchorus olitorius HOM05D000045 ORTHO05D000611 9.7e-06 53.1 55 45.5


User provided reference genes

Program Settings