Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 7.1e-130 467.2 231 100.0
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 1.4e-96 356.7 241 75.5
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 2.8e-94 349.0 240 73.8
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 1.4e-85 320.1 267 65.9
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 8.6e-75 284.3 242 63.6
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 4.6e-68 261.9 241 60.2
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 3.9e-67 258.8 233 60.9
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 5.2e-64 248.4 236 61.0
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 5.8e-63 245.0 241 57.3
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 5.4e-61 238.4 250 58.0
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 5.2e-48 195.3 175 64.0
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.2e-41 174.1 234 46.6
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 2.1e-41 173.3 231 48.5
Medtr6g023085 Medicago truncatula HOM05D007349 ORTHO05D009317 3.1e-40 169.5 98 87.8
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 6.9e-40 168.3 243 44.9
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 1.7e-38 163.7 231 45.9
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 2.4e-37 159.8 235 43.4
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 4.2e-37 159.1 258 41.5
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 6.0e-36 155.2 170 53.5
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 3.0e-35 152.9 234 43.6
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 5.1e-35 152.1 234 43.6
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 6.6e-35 151.8 244 43.0
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 6.6e-35 151.8 234 41.0
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 2.5e-34 149.8 237 43.5
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 3.3e-34 149.4 231 43.7
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 4.3e-34 149.1 233 41.2
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 7.3e-34 148.3 234 42.7
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 9.6e-34 147.9 236 43.2
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 1.6e-33 147.1 235 42.6
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.6e-33 147.1 246 40.2
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 4.8e-33 145.6 232 42.2
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 4.8e-33 145.6 228 43.9
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 1.8e-32 143.7 234 43.6
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 2.6e-31 139.8 229 38.4
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 3.4e-31 139.4 231 40.7
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 3.4e-31 139.4 235 42.1
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 9.9e-31 137.9 251 41.0
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 2.2e-30 136.7 233 40.3
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.9e-30 136.3 235 41.7
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 6.4e-30 135.2 259 38.6
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 6.4e-30 135.2 239 40.6
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 8.4e-30 134.8 241 39.0
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 2.4e-29 133.3 238 39.5
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 7.1e-29 131.7 287 38.7
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 1.2e-28 131.0 233 39.9
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.6e-28 130.6 237 39.2
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 2.1e-28 130.2 276 37.0
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 3.5e-28 129.4 263 38.0
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.0e-27 127.9 247 40.5
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 1.3e-27 127.5 260 39.6
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.3e-27 127.5 239 38.5
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.3e-27 127.5 264 37.9
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 3.9e-27 125.9 251 37.5
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 8.7e-27 124.8 271 35.8
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.5e-26 124.0 239 39.3
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 1.9e-26 123.6 266 36.8
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 1.9e-26 123.6 262 36.6
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 1.9e-26 123.6 225 39.6
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 3.3e-26 122.9 88 70.5
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 5.6e-26 122.1 247 38.5
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 7.4e-26 121.7 240 38.8
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 9.6e-26 121.3 266 39.1
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 2.1e-25 120.2 258 38.0
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 2.1e-25 120.2 146 52.7
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 2.8e-25 119.8 262 35.9
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 2.8e-25 119.8 277 33.2
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 3.7e-25 119.4 264 38.3
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 6.2e-25 118.6 266 38.3
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 1.1e-24 117.9 261 37.5
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 6.9e-24 115.2 237 39.2
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 2.0e-23 113.6 290 33.4
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 3.4e-23 112.8 250 32.4
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 1.7e-22 110.5 262 35.9
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 1.7e-22 110.5 251 36.3
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 2.2e-22 110.2 197 36.5
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 8.4e-22 108.2 226 36.3
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.2e-20 104.4 218 35.3
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 6.0e-20 102.1 236 33.1
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 3.9e-19 99.4 240 31.7
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 1.9e-18 97.1 124 45.2
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.9e-18 97.1 248 30.6
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 1.9e-18 97.1 86 55.8
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 3.7e-17 92.8 166 36.7
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 8.2e-17 91.7 88 53.4
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 1.4e-16 90.9 80 56.2
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.8e-16 90.5 83 53.0
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 3.1e-16 89.7 240 32.1
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 9.0e-16 88.2 247 32.0
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 5.8e-15 85.5 237 33.3
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.5e-12 76.3 199 31.2
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 8.7e-11 71.6 164 37.2
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 1.9e-10 70.5 98 41.8
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 3.3e-10 69.7 79 44.3
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 7.4e-10 68.6 111 37.8
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 9.7e-10 68.2 83 44.6
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.4e-08 64.3 42 64.3
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 2.2e-06 57.0 212 31.1


User provided reference genes

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