Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 3.4e-50 201.4 107 100.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 1.6e-39 166.0 107 82.2
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.1e-37 159.8 107 76.6
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 9.6e-37 156.8 107 76.6
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 3.6e-36 154.8 107 76.6
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.2e-34 149.8 105 72.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.5e-34 149.4 107 73.8
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-34 149.4 107 72.9
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 9.9e-34 146.7 107 72.9
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 5.4e-32 141.0 107 71.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 2.7e-31 138.7 102 71.6
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 68.0
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 68.0
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.5e-31 138.3 107 71.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 4.6e-31 137.9 102 70.6
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 69.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.0e-30 136.7 107 69.2
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.3e-30 136.3 105 69.5
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 70.5
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 69.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.3e-30 135.6 105 67.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.1e-30 134.4 105 68.6
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 5.1e-30 134.4 103 68.9
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 8.7e-30 133.7 105 66.7
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.5e-29 132.1 103 68.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 4.3e-29 131.3 103 67.0
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.3e-29 131.3 100 68.0
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.3e-29 131.3 100 68.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.6e-29 131.0 104 66.3
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 5.6e-29 131.0 105 65.7
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 7.3e-29 130.6 105 63.8
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.3e-28 129.8 100 67.0
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.3e-28 129.8 100 67.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-28 129.8 101 67.3
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.3e-28 129.8 101 67.3
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.6e-28 129.4 107 65.4
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.6e-28 129.4 105 61.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.6e-28 129.4 103 66.0
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.6e-28 129.4 105 66.7
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 2.1e-28 129.0 102 69.6
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.8e-28 128.6 105 63.8
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 3.6e-28 128.3 104 65.4
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.6e-28 128.3 100 67.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 4.8e-28 127.9 86 75.6
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.8e-28 127.9 105 64.8
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 107 63.6
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 8.1e-28 127.1 101 65.3
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 8.1e-28 127.1 103 65.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 8.1e-28 127.1 103 65.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.1e-27 126.7 105 62.9
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.1e-27 126.7 102 65.7
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.4e-27 126.3 102 64.7
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 63.1
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 65.0
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 63.1
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.4e-27 125.6 107 60.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.4e-27 125.6 103 62.1
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.1e-27 125.2 99 65.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.3e-27 124.4 119 58.8
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 6.9e-27 124.0 101 63.4
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 9.0e-27 123.6 101 63.4
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 1.2e-26 123.2 103 63.1
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.2e-26 123.2 107 58.9
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.2e-26 123.2 103 60.2
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.2e-26 123.2 103 63.1
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 1.2e-26 123.2 104 59.6
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.5e-26 122.9 104 61.5
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.5e-26 122.9 101 64.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.5e-26 122.9 104 60.6
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 103 60.2
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.5e-26 122.9 101 66.3
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 103 61.2
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 59.6
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 59.6
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 59.6
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 59.6
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 4.5e-26 121.3 104 59.6
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 4.5e-26 121.3 103 61.2
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 4.5e-26 121.3 101 64.4
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 5.8e-26 120.9 104 58.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 9.9e-26 120.2 103 62.1
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 9.9e-26 120.2 101 61.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.7e-25 119.4 104 58.7
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.7e-25 119.4 103 59.2
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.7e-25 119.4 105 61.0
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.7e-25 119.4 103 61.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.2e-25 119.0 102 61.8
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.8e-25 118.2 100 63.0
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 6.4e-25 117.5 104 58.7
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 6.4e-25 117.5 104 57.7
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.4e-24 116.3 106 58.5
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 3.2e-24 115.2 103 61.2
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.6e-23 112.8 157 48.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.1e-23 112.5 103 57.3
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 2.1e-23 112.5 103 58.3
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.5e-23 111.7 103 58.3
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 1.3e-22 109.8 99 58.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 2.3e-22 109.0 101 54.5
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 4.3e-21 104.8 101 56.4
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 5.6e-21 104.4 81 66.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 5.6e-21 104.4 101 55.4
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 4.8e-20 101.3 101 55.4
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.1e-19 100.1 99 55.6
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 5.3e-19 97.8 99 54.5
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 6.9e-19 97.4 81 64.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.5e-18 96.3 101 52.5
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.4e-18 95.1 79 63.3
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 7.6e-18 94.0 79 60.8
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 7.6e-18 94.0 79 62.0
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.3e-17 93.2 75 64.0
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 2.2e-17 92.4 82 62.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.1e-16 90.1 85 57.6
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 5.5e-16 87.8 92 50.0
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.1e-16 87.4 77 59.7
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 9.3e-16 87.0 77 59.7
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.7e-15 85.5 79 62.0
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 3.5e-15 85.1 176 33.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 6.7e-14 80.9 95 46.3
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.9e-13 79.3 75 56.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 3.3e-13 78.6 93 44.1
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 5.6e-13 77.8 76 51.3
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 7.6e-10 67.4 53 64.2
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 6.0e-07 57.8 53 52.8
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 6.0e-07 57.8 53 52.8
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 6.7e-06 54.3 70 40.0


User provided reference genes

Program Settings