Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g087050 Medicago truncatula HOM05D000361 ORTHO05D004243 3.6e-62 241.5 132 100.0
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 2.1e-09 66.2 35 91.4
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.7e-09 65.9 37 83.8
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 2.7e-09 65.9 35 91.4
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 2.7e-09 65.9 35 91.4
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 2.7e-09 65.9 35 91.4
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 2.7e-09 65.9 35 91.4
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 6.1e-09 64.7 36 86.1
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 8.0e-09 64.3 35 88.6
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 8.0e-09 64.3 35 88.6
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 1.0e-08 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 1.0e-08 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.3e-08 62.8 35 85.7
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 2.3e-08 62.8 35 85.7
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.0e-08 62.4 35 85.7
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 3.0e-08 62.4 35 85.7
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 3.0e-08 62.4 35 85.7
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.0e-08 62.0 35 85.7
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 8.8e-08 60.8 35 85.7
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 3.3e-07 58.9 37 81.1
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 3.3e-07 58.9 37 81.1
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 3.3e-07 58.9 37 81.1
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 3.3e-07 58.9 37 81.1
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 7.5e-07 57.8 38 73.7
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 7.5e-07 57.8 35 82.9
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 7.5e-07 57.8 35 80.0
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 9.7e-07 57.4 35 82.9
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 77.1
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 9.7e-07 57.4 35 82.9
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.3e-06 57.0 35 80.0
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 1.3e-06 57.0 35 80.0
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 1.3e-06 57.0 35 80.0
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.3e-06 57.0 37 78.4
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 1.3e-06 57.0 35 80.0
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 1.3e-06 57.0 35 80.0
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 77.1
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 2.2e-06 56.2 35 80.0
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 2.8e-06 55.8 35 80.0
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 2.8e-06 55.8 35 77.1
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 2.8e-06 55.8 35 77.1
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 2.8e-06 55.8 35 80.0
Psat3g007120 Pisum sativum HOM05D004404 ORTHO05D005070 3.7e-06 55.5 46 76.1
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 3.7e-06 55.5 35 80.0
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 3.7e-06 55.5 34 82.4
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 3.7e-06 55.5 34 82.4
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 4.8e-06 55.1 35 77.1
Medtr7g115180 Medicago truncatula HOM05D004404 ORTHO05D005070 4.8e-06 55.1 46 78.3
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 4.8e-06 55.1 35 80.0
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 4.8e-06 55.1 34 79.4
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 6.3e-06 54.7 35 77.1
TPR.G6977 Trifolium pratense HOM05D004404 ORTHO05D005070 6.3e-06 54.7 46 76.1
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 8.2e-06 54.3 34 79.4
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 8.2e-06 54.3 35 80.0
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 8.2e-06 54.3 34 82.4
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 8.2e-06 54.3 35 74.3
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 8.2e-06 54.3 34 82.4


User provided reference genes

Program Settings