Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 9.8e-139 496.9 268 100.0
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 1.8e-71 273.5 237 68.8
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 3.0e-63 246.1 237 65.8
Ca_10269_v3 Cicer arietinum L. HOM05D012173 ORTHO05D004310 5.0e-58 228.8 242 62.8
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 5.0e-50 202.2 242 55.4
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 1.9e-49 200.3 227 57.3
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 3.2e-49 199.5 238 56.3
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 2.6e-46 189.9 242 56.2
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 8.0e-40 168.3 235 48.9
Lj5g0021212 Lotus japonicus HOM05D012173 ORTHO05D004310 5.7e-38 162.2 225 51.6
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea HOM05D012173 ORTHO05D004310 5.3e-28 129.0 214 45.8
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 3.5e-27 126.3 224 42.0
Phvul.007G212700 Phaseolus vulgaris HOM05D012173 ORTHO05D004310 5.9e-27 125.6 235 43.0
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 7.7e-27 125.2 235 46.4
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.7e-21 107.5 247 40.9
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 2.4e-20 103.6 238 40.8
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 2.7e-19 100.1 238 39.9
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 7.7e-19 98.6 218 42.7
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 3.8e-18 96.3 233 38.2
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 1.1e-17 94.7 273 36.6
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.9e-17 94.0 227 37.9
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 1.9e-17 94.0 231 38.1
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 4.7e-16 89.4 241 34.4
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 4.7e-16 89.4 231 39.8
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 8.0e-16 88.6 223 38.6
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.0e-15 88.2 230 33.5
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 1.5e-14 84.3 240 36.2
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.5e-14 84.3 239 35.1
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 1.5e-14 84.3 147 40.8
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 2.6e-14 83.6 227 34.4
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 5.7e-14 82.4 227 37.0
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 5.7e-14 82.4 220 33.6
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 1.7e-13 80.9 214 33.6
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 2.2e-13 80.5 239 31.4
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 3.7e-13 79.7 220 34.1
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 6.3e-13 79.0 242 34.3
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 1.8e-12 77.4 236 33.5
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea HOM05D012173 ORTHO05D004310 4.1e-12 76.3 79 57.0
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.2e-11 74.7 233 34.3
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 7.8e-11 72.0 236 33.1
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 1.0e-10 71.6 240 34.6
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.7e-10 70.9 231 36.8
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 6.6e-10 68.9 232 32.8
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.1e-09 68.2 228 35.1
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 7.3e-09 65.5 224 33.9
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 7.3e-09 65.5 238 33.2
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 1.2e-08 64.7 232 31.9
CANSAT54G0035 Cannabis sativa HOM05D009154 ORTHO05D014149 2.1e-08 63.9 139 36.7
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 2.1e-08 63.9 231 34.2
HanXRQChr08g0232271 Helianthus annuus HOM05D009154 ORTHO05D004310 2.1e-08 63.9 197 29.9
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.8e-08 63.5 237 34.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.8e-08 63.5 228 36.4
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 3.6e-08 63.2 220 35.0
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 2.3e-07 60.5 233 32.2
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 2.3e-07 60.5 190 33.7
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 8.9e-07 58.5 238 33.2
ECA247G1084 Erigeron canadensis HOM05D009154 ORTHO05D004310 8.9e-07 58.5 208 29.3
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.5e-06 57.8 238 31.1
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 1.5e-06 57.8 74 47.3
CARHR001700 Cardamine hirsuta HOM05D009037 ORTHO05D011187 4.4e-06 56.2 187 31.6
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 5.8e-06 55.8 74 48.6
DCAR_005743 Daucus carota HOM05D009154 ORTHO05D004310 9.8e-06 55.1 235 28.1
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 9.8e-06 55.1 189 33.9


User provided reference genes

Program Settings