Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 2.9e-41 171.4 82 100.0
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 2.2e-33 145.2 81 85.2
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 2.9e-33 144.8 81 86.4
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-32 142.5 80 85.0
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 5.4e-32 140.6 81 85.2
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 2.1e-31 138.7 82 85.4
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 5.1e-30 134.0 82 80.5
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 5.1e-30 134.0 82 80.5
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.1e-29 132.9 85 78.8
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 1.9e-29 132.1 83 81.9
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 2.5e-29 131.7 85 80.0
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 3.3e-29 131.3 85 78.8
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 4.3e-29 131.0 85 78.8
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 7.3e-29 130.2 74 85.1
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 1.1e-27 126.3 84 78.6
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 4.0e-27 124.4 82 75.6
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 5.3e-27 124.0 85 75.3
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 5.1e-22 107.5 84 69.0
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 5.6e-21 104.0 83 71.1
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 7.4e-21 103.6 82 64.6
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 3.7e-20 101.3 83 63.9
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 3.7e-20 101.3 83 63.9
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.8e-20 100.9 82 63.4
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.8e-20 100.9 82 63.4
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 2.4e-19 98.6 85 65.9
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 6.9e-19 97.1 82 63.4
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.2e-18 96.3 82 63.4
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.5e-18 95.9 82 62.2
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 3.4e-18 94.7 82 62.2
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 7.6e-18 93.6 82 62.2
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 1.0e-17 93.2 72 65.3
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 8.4e-17 90.1 84 60.7
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.2e-15 86.3 83 55.4
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.2e-15 86.3 83 55.4
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 2.7e-15 85.1 84 54.8
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 3.5e-15 84.7 87 55.2
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 3.5e-15 84.7 87 55.2
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 7.9e-15 83.6 82 53.7
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.8e-14 82.4 88 56.8
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 1.8e-14 82.4 80 52.5
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 3.9e-14 81.3 82 52.4
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 5.1e-14 80.9 76 52.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 5.1e-14 80.9 76 52.6
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 8.7e-14 80.1 87 51.7
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 1.5e-13 79.3 81 53.1
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 1.5e-13 79.3 72 56.9
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 3.3e-13 78.2 81 54.3
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 3.3e-13 78.2 79 51.9
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 3.3e-13 78.2 84 54.8
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.3e-12 76.3 89 52.8
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.6e-12 75.9 82 50.0
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 2.1e-12 75.5 82 54.9
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 2.8e-12 75.1 88 55.7
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 3.7e-12 74.7 80 53.8
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 4.8e-12 74.3 82 51.2
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 1.1e-11 73.2 71 54.9
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-11 72.4 80 55.0
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-11 72.4 80 55.0
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-11 71.6 83 50.6
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-11 71.6 83 50.6
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 4.0e-11 71.2 84 52.4
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-10 69.7 83 49.4
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 2.6e-10 68.6 78 48.7
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 3.4e-10 68.2 84 46.4
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.6e-10 67.0 77 51.9
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.0e-09 66.6 83 50.6
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.2e-09 65.5 87 49.4
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.2e-09 65.5 87 46.0
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 5.0e-09 64.3 85 47.1
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 6.5e-09 63.9 85 47.1
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 6.5e-09 63.9 85 47.1
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 6.5e-09 63.9 84 44.0
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 83 47.0
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 83 47.0
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 1.1e-08 63.2 79 43.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.5e-08 62.0 83 49.4
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.2e-08 61.6 87 47.1
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.2e-08 61.6 87 43.7
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.2e-08 61.2 87 44.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.2e-08 61.2 87 44.8
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 4.2e-08 61.2 86 43.0
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.5e-08 60.8 87 46.0
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 7.1e-08 60.5 82 45.1
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.2e-07 59.7 89 49.4
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.6e-07 59.3 70 47.1
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.1e-07 58.9 86 40.7
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 2.1e-07 58.9 62 51.6
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.5e-07 58.2 89 43.8
VMungo1383G2747 Vigna mungo HOM05D008018 ORTHO05D001531 3.5e-07 58.2 71 47.9
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.6e-07 57.8 89 44.9
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.6e-07 57.8 89 44.9
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.6e-07 57.8 89 44.9
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 6.1e-07 57.4 71 46.5
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 6.1e-07 57.4 71 46.5
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 7.9e-07 57.0 74 41.9
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 7.9e-07 57.0 73 47.9
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 7.9e-07 57.0 92 41.3
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.0e-06 56.6 79 48.1
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 1.3e-06 56.2 71 45.1
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.8e-06 55.8 87 40.2
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 2.3e-06 55.5 86 46.5
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 2.3e-06 55.5 69 49.3
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.0e-06 55.1 92 41.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.0e-06 55.1 87 42.5
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.0e-06 55.1 87 42.5
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.0e-06 55.1 87 42.5
Sed0010612 Sechium edule HOM05D008018 ORTHO05D001531 3.0e-06 55.1 73 46.6
ClCG03G017890 Citrullus lanatus HOM05D002165 ORTHO05D001531 6.7e-06 53.9 95 40.0
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 8.7e-06 53.5 64 46.9


User provided reference genes

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