Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 3.7e-44 181.0 84 100.0
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.1e-40 169.5 84 94.0
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 1.3e-36 156.0 80 90.0
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 2.9e-36 154.8 83 86.7
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 3.7e-36 154.5 82 86.6
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 3.7e-36 154.5 82 86.6
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 5.4e-35 150.6 85 85.9
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 2.7e-34 148.3 85 83.5
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-34 147.9 85 83.5
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 5.9e-34 147.1 85 82.4
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 3.0e-33 144.8 85 81.2
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 2.5e-32 141.7 81 85.2
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.8e-31 138.3 85 80.0
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 1.8e-30 135.6 74 86.5
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 9.8e-29 129.8 82 79.3
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 1.1e-27 126.3 81 77.8
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 5.4e-27 124.0 83 75.9
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 4.3e-24 114.4 82 69.5
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 7.3e-24 113.6 85 65.9
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.2e-23 110.5 82 67.1
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 6.2e-23 110.5 82 67.1
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 6.8e-22 107.1 81 66.7
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 6.8e-22 107.1 81 66.7
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 8.9e-22 106.7 82 70.7
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.5e-21 105.9 85 64.7
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 2.6e-21 105.1 85 63.5
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.6e-21 105.1 82 65.9
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 4.4e-21 104.4 85 63.5
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 4.9e-20 100.9 82 63.4
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 8.3e-20 100.1 83 63.9
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 2.1e-18 95.5 72 65.3
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 8.6e-17 90.1 82 57.3
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-16 89.0 78 56.4
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-16 89.0 78 56.4
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.7e-15 84.3 82 52.4
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 6.2e-15 84.0 83 55.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 8.1e-15 83.6 86 53.5
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 3.1e-14 81.6 81 53.1
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 3.1e-14 81.6 81 58.0
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 3.1e-14 81.6 81 58.0
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 4.0e-14 81.3 81 53.1
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 4.0e-14 81.3 85 56.5
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 6.8e-14 80.5 86 52.3
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 8.9e-14 80.1 81 54.3
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 1.2e-13 79.7 84 53.6
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.0e-13 79.0 83 48.2
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-13 79.0 87 48.3
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 4.4e-13 77.8 80 52.5
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 7.6e-13 77.0 82 52.4
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 9.9e-13 76.6 82 51.2
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 9.9e-13 76.6 82 51.2
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 9.9e-13 76.6 84 52.4
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 9.9e-13 76.6 82 50.0
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 1.3e-12 76.3 74 52.7
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.3e-12 76.3 80 52.5
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.7e-12 75.9 86 50.0
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 2.2e-12 75.5 79 53.2
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-11 73.2 80 48.8
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.9e-11 72.4 80 51.2
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 1.9e-11 72.4 83 48.2
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 1.9e-11 72.4 83 48.2
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 7.1e-11 70.5 73 50.7
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 7.1e-11 70.5 83 47.0
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 2.1e-10 68.9 82 46.3
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.3e-09 66.2 77 55.8
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.7e-09 65.9 80 48.8
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.3e-09 65.5 78 50.0
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 5.1e-09 64.3 89 44.9
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 5.1e-09 64.3 77 49.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 8.7e-09 63.5 82 50.0
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 1.1e-08 63.2 85 42.4
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-08 62.8 82 50.0
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-08 62.8 84 47.6
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-08 62.8 85 42.4
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-08 62.8 85 42.4
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 2.5e-08 62.0 92 45.7
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.3e-08 61.6 88 47.7
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.3e-08 61.6 84 46.4
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 44.9
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 44.9
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 44.9
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.3e-08 61.2 84 47.6
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 5.6e-08 60.8 82 46.3
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 5.6e-08 60.8 82 46.3
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.2e-07 59.7 84 42.9
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.2e-07 59.7 84 42.9
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.2e-07 59.7 84 42.9
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.2e-07 59.7 86 43.0
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.2e-07 59.7 85 43.5
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 1.2e-07 59.7 89 46.1
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.1e-07 58.9 86 48.8
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 2.1e-07 58.9 89 43.8
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.1e-07 58.9 89 43.8
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 2.1e-07 58.9 91 46.2
VMungo1383G2747 Vigna mungo HOM05D008018 ORTHO05D001531 2.1e-07 58.9 75 42.7
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.8e-07 58.5 82 42.7
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.6e-07 58.2 85 43.5
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.7e-07 57.8 82 46.3
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 4.7e-07 57.8 71 47.9
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.7e-07 57.8 66 47.0
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 8.1e-07 57.0 77 45.5
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 8.1e-07 57.0 40 60.0
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 8.1e-07 57.0 40 60.0
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 8.1e-07 57.0 88 48.9
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 8.1e-07 57.0 79 45.6
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.4e-06 56.2 59 55.9
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 1.4e-06 56.2 92 44.6
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.8e-06 55.8 78 48.7
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.1e-06 55.1 79 44.3
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 4.0e-06 54.7 78 46.2
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.0e-06 54.7 82 41.5
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.0e-06 54.7 82 43.9
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 4.0e-06 54.7 69 49.3
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 5.2e-06 54.3 76 40.8
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 5.2e-06 54.3 72 45.8
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.9e-06 53.9 84 42.9
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-06 53.9 81 44.4
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 6.9e-06 53.9 84 42.9
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-06 53.9 84 42.9
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 6.9e-06 53.9 81 44.4
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 6.9e-06 53.9 81 44.4
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 6.9e-06 53.9 84 42.9
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.9e-06 53.9 75 44.0
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 6.9e-06 53.9 78 41.0
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 9.0e-06 53.5 70 47.1
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 9.0e-06 53.5 85 43.5
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 9.0e-06 53.5 66 48.5


User provided reference genes

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