Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 7.7e-251 870.5 633 100.0
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 2.5e-124 450.3 645 67.0
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 1.8e-122 444.1 689 64.0
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 4.0e-74 283.5 663 49.8
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 1.7e-61 241.5 683 46.1
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 3.4e-57 227.3 656 36.7
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 3.9e-53 213.8 664 32.1
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 2.9e-48 197.6 664 35.1
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 3.1e-42 177.6 678 30.7
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 4.0e-42 177.2 711 29.8
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 1.1e-39 169.1 682 28.0
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 9.3e-31 139.4 679 32.3
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.2e-30 139.0 675 29.3
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.8e-29 135.2 714 29.4
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 2.2e-27 128.3 302 34.1
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 2.0e-25 121.7 659 24.9
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 4.5e-25 120.6 304 32.6
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 2.9e-24 117.9 169 44.4
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 5.0e-24 117.1 793 29.4
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.1e-23 115.9 173 43.9
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.2e-23 114.0 702 30.1
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 9.4e-23 112.8 703 28.3
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.1e-22 111.7 702 30.1
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.7e-22 111.3 685 28.3
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 3.0e-21 107.8 171 43.9
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 1.1e-20 105.9 703 28.3
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.5e-20 105.5 648 28.2
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 1.7e-19 102.1 163 42.9
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.2e-19 101.7 163 42.9
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.8e-19 101.3 160 43.8
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 6.3e-19 100.1 163 42.3
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 6.3e-19 100.1 174 42.0
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 6.3e-19 100.1 174 42.0
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 8.2e-19 99.8 168 38.7
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 1.8e-18 98.6 661 24.7
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 1.8e-18 98.6 661 24.7
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.8e-18 98.6 161 42.2
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 7.7e-17 93.2 166 36.7
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 2.9e-16 91.3 716 29.6
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.5e-16 90.1 169 34.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.4e-15 89.0 699 31.3
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.2e-15 87.8 169 34.3
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 2.7e-14 84.7 128 46.1
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 3.6e-14 84.3 173 35.8
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 1.4e-13 82.4 550 35.5
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 1.8e-13 82.0 167 35.9
Lalb_Chr18g0045421 Lupinus albus HOM05D004923 ORTHO05D005940 3.0e-13 81.3 264 29.9
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.9e-13 80.9 142 39.4
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 8.8e-13 79.7 696 30.5
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 2.6e-12 78.2 700 21.0
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 4.4e-12 77.4 668 23.1
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 5.7e-12 77.0 149 34.9
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 5.7e-12 77.0 706 23.1
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 5.7e-12 77.0 146 36.3
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 7.4e-12 76.6 705 24.5
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 7.4e-12 76.6 164 32.3
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.3e-11 75.9 695 28.1
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 2.2e-11 75.1 132 37.9
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 3.7e-11 74.3 640 21.7
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 6.3e-11 73.6 756 31.5
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 1.1e-10 72.8 702 21.7
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 1.4e-10 72.4 136 36.8
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.4e-10 71.6 161 32.9
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 4.1e-10 70.9 140 37.9
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 4.1e-10 70.9 707 28.1
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 4.1e-10 70.9 108 42.6
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 5.3e-10 70.5 167 34.7
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 5.3e-10 70.5 180 33.3
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 5.3e-10 70.5 541 23.8
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 9.1e-10 69.7 176 33.0
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 9.1e-10 69.7 114 43.9
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 9.1e-10 69.7 173 31.2
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.2e-09 69.3 128 38.3
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.6e-09 68.9 704 33.2
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 2.0e-09 68.6 136 33.8
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 2.0e-09 68.6 136 33.8
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 2.6e-09 68.2 110 41.8
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 3.5e-09 67.8 172 32.0
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 4.5e-09 67.4 164 30.5
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 5.9e-09 67.0 663 27.3
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 7.7e-09 66.6 143 35.0
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.0e-08 66.2 150 31.3
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.0e-08 66.2 168 33.9
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 1.7e-08 65.5 106 37.7
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 1.7e-08 65.5 136 32.4
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.7e-08 65.5 128 35.9
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.9e-08 64.7 120 38.3
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 5.0e-08 63.9 127 33.1
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 5.0e-08 63.9 711 24.6
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 6.5e-08 63.5 174 29.3
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 6.5e-08 63.5 177 31.1
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 6.5e-08 63.5 177 31.1
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.9e-07 62.0 113 34.5
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 2.5e-07 61.6 300 28.0
Lj5g0022619 Lotus japonicus HOM05D000160 ORTHO05D000914 3.2e-07 61.2 186 34.4
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 4.2e-07 60.8 701 22.7
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 5.5e-07 60.5 710 29.6
QL01p001837 Quercus lobata HOM05D004923 ORTHO05D005940 7.2e-07 60.1 81 39.5
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.6e-06 58.9 714 24.9
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 1.6e-06 58.9 106 41.5
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 1.6e-06 58.9 673 22.3
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 2.1e-06 58.5 99 39.4
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 2.1e-06 58.5 154 33.1
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 2.1e-06 58.5 132 36.4
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 4.7e-06 57.4 640 26.6
Lj5g0000463 Lotus japonicus HOM05D000160 ORTHO05D000914 4.7e-06 57.4 115 37.4
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 4.7e-06 57.4 78 46.2
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 4.7e-06 57.4 706 30.3
Glyma.19G085166 Glycine max HOM05D004923 ORTHO05D005940 8.0e-06 56.6 195 31.3
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 8.0e-06 56.6 88 39.8


User provided reference genes

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