Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g081425 Medicago truncatula HOM05D000214 ORTHO05D013285 2.5e-62 241.9 118 100.0
Medtr1g075047 Medicago truncatula HOM05D000214 ORTHO05D013285 1.4e-28 129.8 69 88.4
TPR.G31250 Trifolium pratense HOM05D000214 ORTHO05D013285 4.4e-27 124.8 72 81.9
Medtr8g021110 Medicago truncatula HOM05D000214 ORTHO05D013285 1.7e-26 122.9 68 86.8
CARHR262640 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.0e-23 113.6 71 76.1
TPR.G39998 Trifolium pratense HOM05D000214 ORTHO05D000131 1.1e-22 110.2 74 70.3
Medtr7g089470 Medicago truncatula HOM05D000214 ORTHO05D013285 2.5e-22 109.0 103 60.2
Medtr4g083410 Medicago truncatula HOM05D000214 ORTHO05D013285 5.6e-22 107.8 87 62.1
CARHR121710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.3e-22 107.5 73 74.0
CARHR216870 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.3e-21 106.7 62 80.6
CARHR180980 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.8e-20 102.8 70 68.6
CARHR287750 Cardamine hirsuta HOM05D000214 ORTHO05D013285 3.1e-20 102.1 70 71.4
Medtr8g080930 Medicago truncatula HOM05D000214 ORTHO05D013285 2.2e-18 95.9 60 78.3
CARHR256390 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.9e-18 95.5 57 80.7
CARHR115290 Cardamine hirsuta HOM05D000214 ORTHO05D013285 6.4e-18 94.4 64 68.8
Medtr4g053360 Medicago truncatula HOM05D000214 ORTHO05D013285 4.3e-14 81.6 44 84.1
Medtr8g017060 Medicago truncatula HOM05D006550 ORTHO05D008630 1.7e-10 69.7 35 88.6
Medtr3g108300 Medicago truncatula HOM05D006550 ORTHO05D008630 2.2e-10 69.3 47 72.3
BolC6t37666H Brassica oleracea HOM05D000214 ORTHO05D000131 7.1e-09 64.3 73 45.2
CARHR183200 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.1e-08 62.8 42 69.0
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 6.7e-07 57.8 73 39.7
CARHR051840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.1e-06 57.0 74 41.9
BcaB04g19150 Brassica carinata HOM05D000214 ORTHO05D000131 1.5e-06 56.6 80 40.0
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-06 56.6 71 40.8
CARHR271650 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.9e-06 56.2 74 41.9
BolC6t36374H Brassica oleracea HOM05D000214 ORTHO05D027157 3.3e-06 55.5 73 42.5
BolC6t36376H Brassica oleracea HOM05D042146 ORTHO05D027157 3.3e-06 55.5 73 42.5


User provided reference genes

Program Settings