Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 2.5e-215 751.9 395 100.0
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 3.3e-183 645.2 398 87.4
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 2.3e-181 639.0 400 85.5
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 4.7e-166 588.2 404 80.2
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 6.6e-160 567.8 400 77.2
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 6.2e-158 561.2 417 74.6
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.0e-156 556.2 405 75.8
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.6e-156 555.8 418 73.7
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.9e-154 549.7 397 73.8
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 9.6e-151 537.3 406 74.1
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.8e-149 533.1 406 73.4
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 5.3e-141 505.0 406 68.0
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.7e-139 500.0 409 67.5
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 9.3e-138 494.2 409 67.0
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 5.1e-136 488.4 414 65.2
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.6e-134 483.4 401 66.8
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 2.8e-134 482.6 407 66.3
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 6.3e-134 481.5 414 64.0
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.3e-134 481.5 402 64.2
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.1e-133 480.7 409 64.5
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.1e-133 479.2 404 65.6
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.1e-133 479.2 410 63.9
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 9.0e-133 477.6 410 64.4
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.3e-131 473.8 402 63.9
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.3e-131 473.8 403 65.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 1.3e-131 473.8 424 62.3
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.7e-131 473.4 409 65.8
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 3.8e-131 472.2 415 63.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 3.2e-130 469.2 413 64.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 5.5e-130 468.4 409 64.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 5.5e-130 468.4 400 64.2
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 9.4e-130 467.6 424 62.7
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 4.6e-129 465.3 363 68.3
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.0e-128 464.2 358 69.0
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.9e-128 462.2 415 63.6
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 1.5e-127 460.3 403 63.5
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 2.5e-127 459.5 396 63.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.7e-126 456.8 396 62.6
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.8e-125 453.4 404 63.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.8e-125 453.4 405 63.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 2.4e-125 453.0 412 61.2
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.6e-124 449.5 427 60.4
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 3.4e-124 449.1 401 63.1
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 4.5e-124 448.7 412 61.2
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.5e-124 448.7 408 61.8
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.7e-124 448.0 422 60.0
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.7e-123 446.8 311 80.7
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.5e-123 444.9 422 60.0
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 8.5e-123 444.5 411 62.3
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 8.5e-123 444.5 403 61.5
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.9e-122 443.4 401 62.6
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.9e-122 443.4 403 61.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.5e-122 443.0 422 60.0
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.5e-122 441.8 422 59.7
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.2e-121 440.7 414 60.1
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.7e-121 439.5 437 59.3
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 3.6e-121 439.1 522 51.9
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.1e-121 438.3 414 59.7
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.0e-120 437.6 398 62.1
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.8e-120 436.8 399 61.2
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 3.9e-120 435.6 397 60.7
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 8.8e-120 434.5 414 59.9
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.1e-119 434.1 338 69.2
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 3.3e-119 432.6 406 59.9
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.2e-118 429.9 402 60.2
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 6.3e-118 428.3 409 60.4
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.8e-117 426.8 402 59.5
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 1.8e-117 426.8 402 60.4
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.4e-117 426.4 426 57.5
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.2e-116 424.1 426 58.7
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.0e-116 423.3 422 59.2
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 2.6e-116 422.9 435 58.6
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.0e-115 421.0 427 57.4
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-115 421.0 427 57.4
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.3e-115 420.6 427 57.1
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.8e-115 419.1 438 56.4
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 6.5e-115 418.3 427 58.1
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.1e-114 417.5 379 61.7
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 5.5e-114 415.2 395 58.2
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 9.4e-114 414.5 431 57.5
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 9.4e-114 414.5 405 59.5
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 9.4e-114 414.5 349 65.9
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.2e-113 414.1 428 56.8
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.7e-113 412.9 428 56.8
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.4e-112 410.6 335 65.4
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.5e-111 407.1 402 57.0
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 9.7e-111 404.4 425 55.5
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.8e-110 402.9 426 56.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.4e-109 400.6 433 55.2
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.4e-109 400.6 414 56.0
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 4.1e-109 399.1 436 54.8
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 2.6e-108 396.4 426 54.2
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.8e-107 392.5 403 55.8
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 2.8e-102 376.3 426 53.3
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.8e-102 376.3 426 54.0
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.2e-100 370.9 405 55.8
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 1.6e-100 370.5 420 52.1
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.9e-98 363.6 427 52.5
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.1e-93 347.8 327 59.3
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.8e-88 330.5 354 54.0
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 2.0e-87 327.0 272 64.3
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 3.4e-87 326.2 309 59.2
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.4e-87 326.2 337 53.1
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 9.8e-87 324.7 319 59.2
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.3e-74 282.7 264 57.2
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.4e-72 277.7 396 44.4
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 4.6e-68 262.7 330 46.4
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 6.0e-68 262.3 414 40.8
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 8.9e-64 248.4 300 50.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 2.6e-63 246.9 208 63.9
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.1e-53 214.9 377 39.0
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 3.9e-43 179.9 143 67.1
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.5e-42 177.2 196 52.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 4.0e-40 169.9 140 62.9
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 5.3e-32 142.9 88 76.1
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.5e-23 114.8 349 27.8
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.7e-22 111.3 475 25.1
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 3.1e-16 90.5 86 57.0
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 3.1e-16 90.5 141 46.1
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.9e-11 73.6 320 24.1
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 9.7e-10 68.9 170 34.1
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 6.3e-09 66.2 66 51.5
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-08 63.9 46 65.2
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 5.3e-08 63.2 46 63.0
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 6.9e-08 62.8 118 37.3
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 1.7e-06 58.2 160 31.9


User provided reference genes

Program Settings