Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.2e-167 593.2 312 100.0
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 9.0e-136 487.3 315 85.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.2e-134 482.6 305 85.6
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 6.1e-116 421.4 305 74.8
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 3.1e-112 409.1 308 72.1
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.3e-110 403.7 317 72.9
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 6.5e-110 401.4 308 70.8
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.5e-109 399.4 308 71.4
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.2e-107 391.7 308 70.8
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.0e-102 377.5 307 70.0
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.5e-101 373.6 307 69.4
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 8.0e-100 367.9 299 66.9
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.6e-98 362.8 280 69.3
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.7e-97 360.1 335 63.6
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.8e-97 359.4 316 63.6
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.2e-97 357.8 316 64.6
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 8.2e-97 357.8 316 64.6
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 2.7e-95 352.8 294 63.9
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 5.0e-94 348.6 296 63.5
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.1e-93 347.4 302 61.9
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.1e-93 347.4 302 61.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 3.2e-93 345.9 319 60.5
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 8.0e-92 341.3 260 67.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 5.2e-91 338.6 295 62.0
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 5.2e-91 338.6 298 61.1
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 1.5e-90 337.0 309 60.5
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.6e-90 336.3 291 63.2
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 4.4e-90 335.5 293 62.8
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 7.5e-90 334.7 316 60.1
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 9.8e-90 334.3 302 59.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 6.3e-89 331.6 319 60.8
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 8.3e-89 331.3 259 66.0
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 8.3e-89 331.3 259 66.0
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.1e-88 330.9 307 59.0
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 1.4e-88 330.5 299 60.5
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.8e-88 330.1 305 61.0
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 1.8e-88 330.1 302 61.6
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.8e-88 330.1 272 65.4
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 3.1e-88 329.3 259 65.6
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 3.1e-88 329.3 261 65.9
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 7.0e-88 328.2 283 61.8
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 7.0e-88 328.2 302 60.3
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 4.5e-87 325.5 300 59.0
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 5.9e-87 325.1 300 61.0
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 7.7e-87 324.7 284 62.0
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 1.3e-86 323.9 301 59.5
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 5.0e-86 322.0 260 63.8
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.1e-85 320.9 300 58.7
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.9e-85 320.1 304 60.2
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.5e-85 319.7 315 58.4
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 2.5e-85 319.7 312 56.7
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 4.2e-85 318.9 311 58.8
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 9.5e-85 317.8 305 59.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.2e-84 317.4 258 64.3
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 3.6e-84 315.8 261 66.3
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 6.1e-84 315.1 309 56.0
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.4e-83 313.9 302 59.3
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.3e-83 313.2 315 56.2
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 8.8e-83 311.2 213 71.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 4.4e-82 308.9 283 61.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 9.8e-82 307.8 271 61.3
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.3e-81 307.4 326 56.4
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.2e-81 306.6 275 61.8
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 2.8e-81 306.2 309 57.9
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.4e-80 303.9 303 56.4
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 2.4e-80 303.1 288 58.7
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 3.1e-80 302.8 262 62.6
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 9.2e-80 301.2 263 61.6
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.5e-79 299.3 287 57.1
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 4.5e-79 298.9 249 62.2
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.7e-78 297.0 307 55.7
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 5.0e-78 295.4 315 54.0
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.3e-77 292.7 315 53.3
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.3e-77 292.7 315 53.0
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 4.3e-77 292.4 302 56.6
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 7.3e-77 291.6 317 54.9
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.2e-76 290.8 229 65.5
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 4.0e-75 285.8 285 55.4
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 8.9e-75 284.6 374 48.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 2.2e-73 280.0 284 55.6
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.9e-73 279.6 337 50.7
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 3.2e-72 276.2 324 50.3
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 5.9e-71 271.9 210 66.7
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 7.8e-71 271.6 308 54.5
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 6.2e-68 261.9 221 64.7
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 6.2e-68 261.9 230 62.2
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.3e-67 260.0 256 55.9
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 2.3e-67 260.0 249 57.0
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.8e-66 255.4 257 53.3
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 4.6e-63 245.7 298 54.0
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.3e-62 244.2 245 60.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 3.9e-62 242.7 238 59.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.5e-61 240.7 188 67.0
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.8e-59 233.8 275 48.0
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.6e-55 220.7 222 56.8
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 2.9e-49 199.9 254 44.1
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 2.7e-47 193.4 148 68.2
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.0e-46 191.4 231 48.1
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.7e-46 190.7 298 43.6
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 6.9e-43 178.7 186 55.9
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 5.1e-38 162.5 267 38.2
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 5.6e-37 159.1 239 42.3
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 2.4e-35 153.7 135 62.2
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.0e-34 150.6 146 54.8
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.7e-33 147.5 160 53.1
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.9e-33 146.7 135 54.8
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.4e-32 143.7 130 54.6
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 4.6e-31 139.4 120 60.8
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.6e-31 139.4 114 62.3
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 6.7e-30 135.6 117 59.8
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.5e-29 133.7 236 39.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 5.6e-29 132.5 123 59.3
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 3.7e-28 129.8 120 59.2
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.3e-25 121.3 212 40.6
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.4e-19 101.3 105 54.3
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.9e-19 99.0 110 51.8
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 7.6e-18 95.5 110 54.5
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 8.2e-12 75.5 74 54.1
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 7.6e-10 68.9 69 52.2
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.2e-07 61.6 118 39.0


User provided reference genes

Program Settings