Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 0.0e+00 1380.9 719 100.0
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 3.3e-226 788.9 726 63.2
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 2.4e-200 703.0 927 50.4
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 3.5e-175 619.4 744 55.1
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 8.7e-126 455.3 759 43.7
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 2.4e-99 367.5 728 40.4
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 2.9e-76 290.8 759 35.3
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 3.2e-75 287.3 717 35.1
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 4.6e-74 283.5 758 34.7
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 2.0e-61 241.5 340 46.5
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 6.6e-57 226.5 659 34.6
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 3.4e-37 161.0 731 28.0
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 5.4e-35 153.7 125 64.0
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 2.8e-31 141.4 870 24.1
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 3.6e-31 141.0 701 25.7
TPR.G478 Trifolium pratense HOM05D007504 ORTHO05D007629 3.6e-31 141.0 129 62.0
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 8.1e-31 139.8 729 28.9
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 5.3e-30 137.1 729 28.5
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.6e-26 125.6 691 25.5
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 2.1e-26 125.2 720 25.6
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 2.3e-25 121.7 701 26.1
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 9.6e-24 116.3 878 24.5
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 2.1e-23 115.2 723 25.9
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 2.1e-23 115.2 899 24.0
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 1.1e-22 112.8 836 24.6
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 1.8e-22 112.1 692 25.4
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.4e-22 111.7 701 28.0
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 5.3e-22 110.5 690 26.2
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.2e-21 109.4 701 24.4
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.2e-21 109.4 85 62.4
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 3.4e-21 107.8 685 25.7
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 5.8e-21 107.1 382 28.5
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 1.7e-20 105.5 731 25.9
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 1.7e-20 105.5 691 25.9
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 3.8e-20 104.4 721 22.9
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 8.4e-20 103.2 725 24.4
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 2.5e-19 101.7 213 34.3
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 7.1e-19 100.1 287 33.4
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 2.7e-18 98.2 768 22.9
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 3.5e-18 97.8 72 66.7
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 7.9e-18 96.7 74 60.8
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 7.9e-18 96.7 688 24.1
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.0e-17 96.3 700 22.9
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 1.3e-17 95.9 425 29.2
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 3.9e-17 94.4 70 60.0
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 3.9e-17 94.4 349 27.8
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 5.1e-17 94.0 71 62.0
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 1.1e-16 92.8 425 28.9
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.9e-16 92.0 707 22.9
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 2.5e-16 91.7 689 26.3
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 4.3e-16 90.9 354 27.1
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 7.4e-16 90.1 106 44.3
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 9.6e-16 89.7 208 34.6
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 1.3e-15 89.4 644 26.7
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.6e-15 89.0 690 25.9
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 1.6e-15 89.0 300 33.0
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 2.1e-15 88.6 206 33.5
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 2.1e-15 88.6 619 24.7
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 3.7e-15 87.8 321 28.0
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.7e-15 87.8 690 22.9
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 4.8e-15 87.4 99 44.4
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 4.8e-15 87.4 150 36.0
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 8.2e-15 86.7 708 23.9
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 1.1e-14 86.3 89 47.2
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 2.4e-14 85.1 691 25.5
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 2.4e-14 85.1 297 31.3
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 1.2e-13 82.8 75 53.3
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 1.2e-13 82.8 703 23.2
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 2.0e-13 82.0 201 34.3
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 1.0e-12 79.7 239 33.9
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 3.8e-12 77.8 82 48.8
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 5.0e-12 77.4 95 42.1
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 5.0e-12 77.4 704 24.6
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 6.5e-12 77.0 102 41.2
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 6.5e-12 77.0 186 31.2
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 8.5e-12 76.6 624 25.3
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.9e-11 75.5 96 40.6
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 2.5e-11 75.1 97 42.3
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 2.5e-11 75.1 97 42.3
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 2.5e-11 75.1 65 53.8
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 3.2e-11 74.7 241 29.9
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 3.2e-11 74.7 720 22.8
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 5.5e-11 73.9 279 29.0
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 7.2e-11 73.6 334 28.4
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 9.3e-11 73.2 344 25.3
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 9.3e-11 73.2 158 31.0
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 1.6e-10 72.4 73 39.7
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 1.6e-10 72.4 124 37.1
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.6e-10 72.4 185 30.3
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 2.1e-10 72.0 252 25.4
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 2.1e-10 72.0 69 46.4
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 4.6e-10 70.9 265 29.1
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 6.1e-10 70.5 95 38.9
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 1.8e-09 68.9 72 41.7
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 1.8e-09 68.9 72 41.7
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.8e-09 68.9 76 42.1
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 2.3e-09 68.6 47 61.7
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 3.0e-09 68.2 66 48.5
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 3.0e-09 68.2 103 36.9
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 3.0e-09 68.2 127 32.3
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 6.7e-09 67.0 97 40.2
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 6.7e-09 67.0 358 24.9
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 6.7e-09 67.0 69 47.8
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 1.1e-08 66.2 194 27.8
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 4.3e-08 64.3 89 36.0
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 4.3e-08 64.3 230 28.3
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 9.7e-08 63.2 74 40.5
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 1.3e-07 62.8 91 36.3
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 1.3e-07 62.8 685 20.0
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.3e-07 62.8 119 35.3
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.8e-07 61.6 123 33.3
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 2.8e-07 61.6 692 23.4
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 3.7e-07 61.2 119 31.9
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 8.2e-07 60.1 102 38.2
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 6.9e-06 57.0 202 27.2


User provided reference genes

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