Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g076590 Medicago truncatula HOM05D000049 ORTHO05D264286 4.1e-53 211.1 102 100.0
Ca_09887_v3 Cicer arietinum L. HOM05D000049 ORTHO05D000027 3.4e-07 58.5 40 67.5
Psat6g114000 Pisum sativum HOM05D000049 ORTHO05D000027 3.4e-07 58.5 40 67.5
TPR.G22815 Trifolium pratense HOM05D000049 ORTHO05D000027 3.4e-07 58.5 40 67.5
Medtr1g076550 Medicago truncatula HOM05D000049 ORTHO05D000027 5.8e-07 57.8 40 65.0
arahy.Tifrunner.gnm1.ann1.QIK1GA Arachis hypogaea HOM05D000049 ORTHO05D000027 9.8e-07 57.0 42 64.3
Cc03_g04480 Coffea canephora HOM05D000049 ORTHO05D000027 9.8e-07 57.0 40 65.0
Hma1.2p1_0897F.1_g234270 Hydrangea macrophylla HOM05D000049 ORTHO05D000027 9.8e-07 57.0 40 65.0
Atru.chr4.2317 Acer truncatum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Ah.01g022370 Amaranthus hybridus HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.5G0THE Arachis hypogaea HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.DJ0WEW Arachis hypogaea HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.HX4EH1 Arachis hypogaea HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.KDZ836 Arachis hypogaea HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.V8ERX6 Arachis hypogaea HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
EL10Ac9g21476 Beta vulgaris HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
CANSAT78G0328 Cannabis sativa HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
CAN.G638.83 Capsicum annuum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
AUR62010132 Chenopodium quinoa HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
AUR62013125 Chenopodium quinoa HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Ciclev10006008m.g Citrus clementina HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
ECA233G0148 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Eucgr.H00507 Eucalyptus grandis HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Glyma.10G178500 Glycine max HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Glyma.20G211300 Glycine max HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Glyma.20G211600 Glycine max HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Gohir.A09G220700 Gossypium hirsutum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Gohir.D09G223000 Gossypium hirsutum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Gorai.006G244300 Gossypium raimondii HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Hma1.2p1_1095F.1_g256550 Hydrangea macrophylla HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Lj5g0007204 Lotus japonicus HOM05D000049 ORTHO05D000027 1.3e-06 56.6 45 60.0
Nitab4.5_0000977g0120 Nicotiana tabacum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Nitab4.5_0003815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Peaxi162Scf00467g00915 Petunia axillaris HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Phvul.007G111100 Phaseolus vulgaris HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Rhsim02G0031400 Rhododendron simsii HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Solyc03g005300.3 Solanum lycopersicum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
Sopen03g001340 Solanum pennellii HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
PGSC0003DMG400013442 Solanum tuberosum HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
vmacro15393 Vaccinium macrocarpon HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
VMungo0720G2680 Vigna mungo HOM05D000049 ORTHO05D000027 1.3e-06 56.6 40 65.0
DCAR_024193 Daucus carota HOM05D000049 ORTHO05D000027 1.7e-06 56.2 35 71.4
DCAR_027255 Daucus carota HOM05D000049 ORTHO05D000027 1.7e-06 56.2 35 71.4
MSTRG.24715 Avicennia marina HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
CDE02G0399 Ceratophyllum demersum HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
CDE05G2566 Ceratophyllum demersum HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
ClCG05G004750 Citrullus lanatus HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
COL.COLO4_13176 Corchorus olitorius HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
MELO3C006488.2 Cucumis melo HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
CsaV3_3G012770 Cucumis sativus L. HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
Sed0014705 Sechium edule HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
Sed0026360 Sechium edule HOM05D000049 ORTHO05D000027 3.7e-06 55.1 40 62.5
Actinidia04497 Actinidia chinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Actinidia27517 Actinidia chinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
ATR0665G235 Amborella trichopoda HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
MSTRG.21884 Avicennia marina HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
MSTRG.4076 Avicennia marina HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
MSTRG.9943 Avicennia marina HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
CSS0004864 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
CSS0024786 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
CSS0033164 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
CSS0048945 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Cpa.g.sc44.137 Carica papaya HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Dinv14064 Davidia involucrata HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Migut.N00224 Erythranthe guttata HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Lsat_1_v5_gn_5_68141 Lactuca sativa HOM05D000049 ORTHO05D000027 4.9e-06 54.7 35 68.6
Lj3A721G32 Lonicera japonica HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Lalb_Chr01g0020871 Lupinus albus HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Lalb_Chr19g0127851 Lupinus albus HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Oeu002612.1 Olea europaea HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Potri.015G142600 Populus trichocarpa HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
QL06p000517 Quercus lobata HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Sabra12G0105000 Salix brachista HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Sabra15G0152600 Salix brachista HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
SalBow3G1724 Salvia bowleyana HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
SGA_v2.0_scaffold79G25611 Striga asiatica HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
GSVIVG01018077001 Vitis vinifera HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 62.5
Zm00001eb200620 Zea mays HOM05D000049 ORTHO05D000027 4.9e-06 54.7 40 60.0
Oeu029252.1 Olea europaea HOM05D000049 ORTHO05D000027 6.4e-06 54.3 40 62.5
PGR142G3190 Punica granatum HOM05D000049 ORTHO05D000027 6.4e-06 54.3 35 68.6
Duzib052G0652 Durio zibethinus HOM05D000049 ORTHO05D000027 8.3e-06 53.9 40 62.5


User provided reference genes

Program Settings