Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 3.8e-77 291.6 165 100.0
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 6.8e-74 280.8 167 98.2
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 2.8e-43 179.1 178 67.4
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 6.0e-38 161.4 157 67.5
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.8e-26 123.2 180 53.3
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 5.3e-26 121.7 180 52.8
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.6e-25 119.4 172 51.7
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 3.4e-25 119.0 168 56.0
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 9.9e-25 117.5 169 55.0
Ca_01307_v3 Cicer arietinum L. HOM05D007264 ORTHO05D008639 8.4e-24 114.4 115 67.8
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.1e-23 114.0 182 50.0
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 2.3e-21 106.3 170 48.8
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.9e-20 103.2 194 44.8
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 9.6e-20 100.9 106 58.5
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.6e-19 100.1 115 50.4
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-19 100.1 115 50.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 2.8e-19 99.4 164 45.7
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.8e-19 99.4 138 47.1
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 2.8e-19 99.4 176 46.0
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.6e-19 99.0 87 64.4
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 4.8e-19 98.6 165 49.7
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 6.2e-19 98.2 183 42.1
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 6.2e-19 98.2 93 60.2
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.1e-18 97.4 164 42.7
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.4e-18 97.1 108 56.5
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.4e-18 97.1 167 44.3
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 2.4e-18 96.3 95 64.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 2.4e-18 96.3 161 47.8
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 3.1e-18 95.9 172 47.7
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 4.0e-18 95.5 170 47.6
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.0e-18 95.5 143 45.5
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 4.0e-18 95.5 163 44.2
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 5.3e-18 95.1 138 46.4
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 6.9e-18 94.7 175 42.9
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 9.0e-18 94.4 132 47.0
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 9.0e-18 94.4 174 47.1
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 9.0e-18 94.4 171 46.2
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 9.0e-18 94.4 170 44.1
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.2e-17 94.0 170 44.1
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.2e-17 94.0 177 44.6
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.2e-17 94.0 114 52.6
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.2e-17 94.0 132 44.7
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.0e-17 93.2 165 44.2
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 3.4e-17 92.4 180 43.3
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 7.6e-17 91.3 164 42.7
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 9.9e-17 90.9 100 58.0
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.7e-16 90.1 148 43.2
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.7e-16 90.1 145 43.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.2e-16 89.7 147 50.3
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.9e-16 89.4 118 50.8
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 3.8e-16 89.0 177 40.7
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.1e-15 87.4 163 41.7
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.1e-15 87.4 97 54.6
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.9e-15 86.7 153 42.5
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.9e-15 86.7 174 46.6
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 2.4e-15 86.3 85 56.5
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.2e-15 85.9 85 55.3
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 4.2e-15 85.5 169 42.0
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 5.5e-15 85.1 163 41.1
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 5.5e-15 85.1 154 43.5
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 5.5e-15 85.1 91 57.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 7.1e-15 84.7 182 44.5
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.1e-14 83.2 81 60.5
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.7e-14 82.8 81 60.5
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 3.5e-14 82.4 170 42.9
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 4.6e-14 82.0 163 39.3
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 4.6e-14 82.0 165 41.2
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 4.6e-14 82.0 179 39.1
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 4.6e-14 82.0 179 39.1
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 4.6e-14 82.0 179 39.1
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 4.6e-14 82.0 136 44.1
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 6.0e-14 81.6 138 44.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 6.0e-14 81.6 138 44.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 6.0e-14 81.6 138 44.9
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 6.0e-14 81.6 175 39.4
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 6.0e-14 81.6 152 41.4
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 7.9e-14 81.3 148 38.5
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.0e-13 80.9 118 46.6
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 2.3e-13 79.7 164 37.8
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 3.9e-13 79.0 177 36.2
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 5.1e-13 78.6 77 59.7
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 6.7e-13 78.2 127 44.9
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.1e-12 77.4 105 49.5
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.9e-12 76.6 169 44.4
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.5e-12 76.3 170 41.2
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 4.3e-12 75.5 74 59.5
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 7.4e-12 74.7 188 34.0
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 9.6e-12 74.3 68 63.2
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 2.1e-11 73.2 182 37.4
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.1e-11 73.2 182 39.6
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 2.8e-11 72.8 163 37.4
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 4.8e-11 72.0 141 42.6
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 8.1e-11 71.2 70 61.4
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.1e-10 69.3 166 38.0
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 9.0e-10 67.8 170 35.9
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.5e-09 67.0 173 35.3
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.0e-09 66.6 161 34.8
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 3.4e-09 65.9 153 37.3
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.4e-07 60.5 67 53.7
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 1.2e-06 57.4 108 38.9


User provided reference genes

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