Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 7.4e-116 420.6 224 100.0
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.6e-89 333.2 224 80.8
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.0e-88 330.5 224 79.9
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.3e-80 303.5 227 75.8
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 3.1e-77 292.4 223 71.7
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 5.2e-77 291.6 225 72.4
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 8.3e-75 284.3 225 70.7
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.6e-70 270.0 226 69.9
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.0e-64 249.2 226 63.7
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 6.6e-64 248.1 225 64.0
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 4.3e-63 245.4 207 68.1
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.6e-62 243.4 227 62.6
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 8.1e-62 241.1 234 62.0
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 8.1e-62 241.1 225 59.6
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.0e-60 236.5 233 59.7
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 1.3e-59 233.8 233 59.2
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.9e-59 232.6 246 60.2
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 4.9e-59 231.9 244 60.7
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 8.4e-59 231.1 228 59.2
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.4e-59 231.1 250 58.0
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.4e-59 231.1 250 58.0
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.1e-58 230.7 226 57.1
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 2.4e-58 229.6 223 60.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.2e-57 227.3 231 60.6
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.2e-57 227.3 246 58.5
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 1.2e-57 227.3 236 57.2
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 1.6e-57 226.9 228 57.9
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.1e-57 226.5 225 58.7
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.7e-57 226.1 232 60.3
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 2.7e-57 226.1 250 55.2
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 2.7e-57 226.1 232 58.6
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 6.0e-57 224.9 228 56.6
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.3e-56 223.0 228 57.9
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.3e-56 223.0 227 57.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.0e-56 222.6 227 58.1
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 6.6e-56 221.5 242 54.5
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 6.6e-56 221.5 198 65.2
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 8.6e-56 221.1 227 57.7
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.9e-55 219.9 227 57.3
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 4.3e-55 218.8 232 56.0
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 5.6e-55 218.4 235 54.0
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 5.6e-55 218.4 238 55.5
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.6e-54 216.9 246 54.5
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 1.6e-54 216.9 227 57.7
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 4.7e-54 215.3 225 58.2
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 6.2e-54 214.9 250 56.0
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 8.1e-54 214.5 237 54.9
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 8.1e-54 214.5 238 54.2
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.4e-53 213.0 229 52.4
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 3.1e-53 212.6 241 53.1
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 5.2e-53 211.8 231 54.5
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 5.2e-53 211.8 233 54.1
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.2e-52 210.7 233 53.6
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.5e-52 210.3 254 52.4
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 4.4e-52 208.8 232 55.2
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 4.4e-52 208.8 254 51.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 5.8e-52 208.4 239 54.4
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 1.7e-51 206.8 232 54.7
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 4.9e-51 205.3 241 52.7
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 6.4e-51 204.9 222 59.0
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 7.1e-50 201.4 226 54.9
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 1.2e-49 200.7 254 50.4
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.6e-49 200.3 237 51.9
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 2.1e-49 199.9 247 52.6
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 6.0e-49 198.4 236 53.8
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 7.8e-49 198.0 256 50.4
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.0e-48 197.6 159 68.6
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.3e-48 197.2 159 68.6
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.7e-48 196.8 235 52.8
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 3.0e-48 196.1 295 44.4
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.5e-47 193.0 190 62.1
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.5e-47 193.0 248 50.0
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 6.2e-46 188.3 193 60.6
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.2e-46 188.3 220 52.3
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 5.3e-45 185.3 230 49.6
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 6.9e-45 184.9 198 54.5
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 3.4e-44 182.6 199 55.8
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 9.9e-44 181.0 203 52.7
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.4e-42 177.2 206 52.4
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 2.1e-41 173.3 197 54.3
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 5.6e-39 165.2 222 49.5
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 2.4e-37 159.8 242 44.2
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 6.9e-37 158.3 124 71.8
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 3.4e-36 156.0 117 69.2
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 9.9e-36 154.5 131 63.4
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.9e-36 154.5 94 80.9
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.3e-35 154.1 228 43.0
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 1.7e-35 153.7 229 41.9
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.2e-35 153.3 229 42.4
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.2e-35 153.3 229 42.4
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.2e-35 153.3 229 42.4
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.2e-35 153.3 116 70.7
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 3.8e-35 152.5 226 42.0
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.8e-35 152.5 229 41.5
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 3.8e-35 152.5 214 46.7
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 6.4e-35 151.8 106 76.4
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 8.4e-35 151.4 227 41.4
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.1e-34 151.0 177 54.2
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.2e-34 149.4 94 77.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 5.5e-34 148.7 228 41.7
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 5.5e-34 148.7 166 53.6
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 3.5e-33 146.0 252 42.1
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 4.6e-33 145.6 106 70.8
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.0e-32 144.4 228 41.2
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.8e-32 143.7 229 40.2
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.9e-32 142.5 194 46.4
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 5.1e-32 142.1 266 40.6
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 1.5e-31 140.6 228 39.0
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 2.5e-31 139.8 283 38.5
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 5.6e-31 138.7 262 37.8
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.3e-30 137.5 175 53.1
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 6.2e-30 135.2 239 39.3
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 3.8e-27 125.9 88 71.6
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.2e-25 120.9 227 37.9
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 2.7e-25 119.8 248 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 1.1e-21 107.8 220 36.8
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 4.1e-21 105.9 170 43.5
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 3.4e-20 102.8 90 61.1
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 5.5e-18 95.5 252 32.1
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.3e-18 94.7 62 72.6
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.7e-17 93.2 66 68.2
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 1.0e-16 91.3 62 71.0
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.8e-16 90.5 132 48.5
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 2.3e-16 90.1 166 41.0
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 2.5e-15 86.7 53 77.4
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.1e-13 79.7 128 43.8
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 9.0e-13 78.2 155 37.4
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 3.4e-12 76.3 143 42.0
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.5e-12 75.9 138 40.6
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 3.8e-11 72.8 62 62.9
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.1e-10 71.2 138 39.1
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.4e-10 70.9 154 35.7
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.2e-10 69.7 99 48.5
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.1e-09 65.5 168 32.7
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 1.0e-08 64.7 223 30.0
QL06p015203 Quercus lobata HOM05D005370 ORTHO05D006659 7.4e-07 58.5 31 90.3


User provided reference genes

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