Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g069680 Medicago truncatula HOM05D006470 ORTHO05D007978 6.2e-111 404.1 193 100.0
Medtr1g069665 Medicago truncatula HOM05D006470 ORTHO05D007978 9.1e-70 267.3 185 70.3
Medtr1g069695 Medicago truncatula HOM05D006470 ORTHO05D007978 6.1e-34 148.3 147 54.4
Psat6g062280 Pisum sativum HOM05D006470 ORTHO05D007978 2.3e-33 146.4 167 50.9
Ca_09663_v3 Cicer arietinum L. HOM05D006470 ORTHO05D007978 1.7e-31 140.2 164 47.6
Psat6g063200 Pisum sativum HOM05D006470 ORTHO05D007978 1.7e-31 140.2 154 51.3
Psat6g062240 Pisum sativum HOM05D006470 ORTHO05D007978 1.0e-28 131.0 143 49.7
Lj5g0015356 Lotus japonicus HOM05D006470 ORTHO05D007978 5.6e-27 125.2 158 44.3
Lalb_Chr25g0289891 Lupinus albus HOM05D006470 ORTHO05D007978 2.1e-26 123.2 154 44.8
arahy.Tifrunner.gnm1.ann1.NTND9X Arachis hypogaea HOM05D006470 ORTHO05D007978 8.9e-25 117.9 168 44.0
VMungo0720G2572 Vigna mungo HOM05D006470 ORTHO05D007978 1.2e-24 117.5 156 42.9
Glyma.13G125201 Glycine max HOM05D006470 ORTHO05D007978 1.5e-24 117.1 150 44.7
MD10G1180100 Malus domestica HOM05D006470 ORTHO05D007978 9.8e-24 114.4 162 42.0
Phvul.007G191000 Phaseolus vulgaris HOM05D006470 ORTHO05D007978 9.8e-24 114.4 155 42.6
Glyma.10G038800 Glycine max HOM05D006470 ORTHO05D007978 1.3e-23 114.0 172 40.1
COL.COLO4_04011 Corchorus olitorius HOM05D006470 ORTHO05D007978 6.4e-23 111.7 151 41.1
Duzib138G0951 Durio zibethinus HOM05D006470 ORTHO05D007978 5.4e-22 108.6 166 39.8
TWI18G0736 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 9.2e-22 107.8 174 38.5
QL09p040137 Quercus lobata HOM05D006470 ORTHO05D007978 1.2e-21 107.5 155 41.3
Cc01_g18070 Coffea canephora HOM05D006470 ORTHO05D007978 2.0e-21 106.7 179 35.2
Ciclev10020031m.g Citrus clementina HOM05D006470 ORTHO05D007978 3.5e-21 105.9 177 36.7
RcHm_v2.0_Chr6g0287531 Rosa chinensis HOM05D006470 ORTHO05D007978 3.5e-21 105.9 158 41.1
A01p09340 Brassica napus HOM05D006470 ORTHO05D007978 6.0e-21 105.1 162 40.1
BraA01t00881Z Brassica rapa HOM05D006470 ORTHO05D007978 6.0e-21 105.1 162 40.1
Duzib133G1499 Durio zibethinus HOM05D006470 ORTHO05D007978 6.0e-21 105.1 150 40.7
Haze_24664 Corylus avellana HOM05D006470 ORTHO05D007978 7.8e-21 104.8 189 35.4
Manes.13G036500 Manihot esculenta HOM05D006470 ORTHO05D007978 7.8e-21 104.8 171 39.8
Nitab4.5_0001945g0030 Nicotiana tabacum HOM05D006470 ORTHO05D007978 1.3e-20 104.0 153 35.9
C01p10920 Brassica napus HOM05D006470 ORTHO05D007978 3.0e-20 102.8 162 39.5
Gohir.D07G156600 Gossypium hirsutum HOM05D006470 ORTHO05D007978 3.0e-20 102.8 144 41.7
Gorai.001G179700 Gossypium raimondii HOM05D006470 ORTHO05D007978 3.0e-20 102.8 144 41.7
Cfa002452 Carpinus fangiana HOM05D006470 ORTHO05D007978 3.9e-20 102.4 189 34.9
FAN20G2495 Fragaria x ananassa HOM05D006470 ORTHO05D007978 6.6e-20 101.7 160 37.5
CAN.G1251.2 Capsicum annuum HOM05D006470 ORTHO05D007978 8.6e-20 101.3 128 43.0
CAN.G1868.1 Capsicum annuum HOM05D006470 ORTHO05D007978 8.6e-20 101.3 128 43.0
SGA_v2.0_scaffold1G00631 Striga asiatica HOM05D006470 ORTHO05D007978 8.6e-20 101.3 188 36.2
BcaC09g51655 Brassica carinata HOM05D006470 ORTHO05D007978 1.1e-19 100.9 162 38.9
BolC1t01056H Brassica oleracea HOM05D006470 ORTHO05D007978 1.1e-19 100.9 162 38.9
Gohir.A07G150300 Gossypium hirsutum HOM05D006470 ORTHO05D007978 1.1e-19 100.9 144 41.7
Lj2P1147T22 Lonicera japonica HOM05D006470 ORTHO05D007978 1.1e-19 100.9 154 40.9
FvH4_2g21070 Fragaria vesca HOM05D006470 ORTHO05D007978 1.5e-19 100.5 161 37.3
PGSC0003DMG400010325 Solanum tuberosum HOM05D006470 ORTHO05D007978 1.5e-19 100.5 125 41.6
FAN24G3268 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.9e-19 100.1 150 38.7
Sopen09g028440 Solanum pennellii HOM05D006470 ORTHO05D007978 1.9e-19 100.1 152 35.5
Prupe.8G220100 Prunus persica HOM05D006470 ORTHO05D007978 2.5e-19 99.8 179 37.4
Solyc09g072630.3 Solanum lycopersicum HOM05D006470 ORTHO05D007978 3.3e-19 99.4 152 35.5
BcaNung04289 Brassica carinata HOM05D006470 ORTHO05D007978 4.3e-19 99.0 134 42.5
BcaNung04688 Brassica carinata HOM05D006470 ORTHO05D007978 4.3e-19 99.0 134 42.5
BcaNung04689 Brassica carinata HOM05D006470 ORTHO05D007978 4.3e-19 99.0 134 42.5
Carub.0007s1211 Capsella rubella HOM05D006470 ORTHO05D007978 4.3e-19 99.0 132 43.9
Dinv22382 Davidia involucrata HOM05D006470 ORTHO05D007978 4.3e-19 99.0 188 36.7
Nitab4.5_0003295g0060 Nicotiana tabacum HOM05D006470 ORTHO05D007978 4.3e-19 99.0 146 34.9
AL7G23980 Arabidopsis lyrata HOM05D006470 ORTHO05D007978 5.6e-19 98.6 132 43.9
CiPaw.03G267400 Carya illinoinensis HOM05D006470 ORTHO05D007978 5.6e-19 98.6 188 36.2
FAN15G1173 Fragaria x ananassa HOM05D006470 ORTHO05D007978 7.3e-19 98.2 164 38.4
FAN27G1109 Fragaria x ananassa HOM05D006470 ORTHO05D007978 9.5e-19 97.8 164 38.4
THA.LOC104814525 Tarenaya hassleriana HOM05D006470 ORTHO05D007978 1.2e-18 97.4 160 38.1
Rhsim13G0037300 Rhododendron simsii HOM05D006470 ORTHO05D007978 1.6e-18 97.1 182 33.5
Sed0015172 Sechium edule HOM05D006470 ORTHO05D007978 1.6e-18 97.1 166 33.1
Peaxi162Scf00415g00003 Petunia axillaris HOM05D006470 ORTHO05D007978 2.8e-18 96.3 128 42.2
CSS0011402 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 3.6e-18 95.9 181 37.0
CSS0034739 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 3.6e-18 95.9 181 37.0
Cpa.g.sc165.30 Carica papaya HOM05D006470 ORTHO05D007978 3.6e-18 95.9 154 39.0
PSO210G2696 Papaver somniferum HOM05D006470 ORTHO05D007978 3.6e-18 95.9 131 42.7
Sabra05G0175600 Salix brachista HOM05D006470 ORTHO05D007978 3.6e-18 95.9 168 38.1
TWI12G0101 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 3.6e-18 95.9 147 37.4
AUR62025485 Chenopodium quinoa HOM05D006470 ORTHO05D007978 4.7e-18 95.5 147 39.5
Sp7g26550 Schrenkiella parvula HOM05D006470 ORTHO05D007978 4.7e-18 95.5 133 42.9
Aa31LG2G21810 Aethionema arabicum HOM05D006470 ORTHO05D007978 8.1e-18 94.7 177 37.3
AT4G28560 Arabidopsis thaliana HOM05D006470 ORTHO05D007978 8.1e-18 94.7 132 41.7
Migut.D00451 Erythranthe guttata HOM05D006470 ORTHO05D007978 1.1e-17 94.4 171 36.3
HanXRQChr10g0280761 Helianthus annuus HOM05D006470 ORTHO05D007978 1.1e-17 94.4 188 33.0
Hma1.2p1_0576F.1_g181850 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 1.1e-17 94.4 158 39.9
SHI26693 Sapria himalayana HOM05D006470 ORTHO05D007978 1.1e-17 94.4 141 41.1
CARHR236350 Cardamine hirsuta HOM05D006470 ORTHO05D007978 1.8e-17 93.6 145 37.2
Thhalv10027034m.g Eutrema salsugineum HOM05D006470 ORTHO05D007978 2.3e-17 93.2 161 37.3
SalBow4G0507 Salvia bowleyana HOM05D006470 ORTHO05D007978 2.3e-17 93.2 131 37.4
TAR362G1291 Trochodendron aralioides HOM05D006470 ORTHO05D007978 4.0e-17 92.4 157 37.6
Lsat_1_v5_gn_5_182700 Lactuca sativa HOM05D006470 ORTHO05D007978 2.0e-16 90.1 179 34.6
Lsat_1_v5_gn_9_10681 Lactuca sativa HOM05D006470 ORTHO05D007978 2.0e-16 90.1 188 33.0
PSO832G0066 Papaver somniferum HOM05D006470 ORTHO05D007978 2.0e-16 90.1 131 41.2
DCAR_012563 Daucus carota HOM05D006470 ORTHO05D007978 3.4e-16 89.4 134 38.8
vmacro02686 Vaccinium macrocarpon HOM05D006470 ORTHO05D007978 2.2e-15 86.7 181 30.9
ECA248G1135 Erigeron canadensis HOM05D006470 ORTHO05D007978 3.7e-15 85.9 175 34.9
Actinidia37529 Actinidia chinensis HOM05D006470 ORTHO05D007978 3.2e-14 82.8 160 31.2
HPP92_012855 Vanilla planifolia HOM05D006470 ORTHO05D007978 1.6e-13 80.5 156 35.3
Sc05g0003180 Simmondsia chinensis HOM05D006470 ORTHO05D007978 1.0e-12 77.8 156 34.0
Aqoxy5G00193 Aquilegia oxysepala HOM05D006470 ORTHO05D007978 1.3e-12 77.4 161 33.5
ATR0736G105 Amborella trichopoda HOM05D006470 ORTHO05D007978 7.3e-11 71.6 141 32.6
CDE02G3387 Ceratophyllum demersum HOM05D006470 ORTHO05D007978 1.2e-10 70.9 153 30.1
SMO358G0434 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 3.6e-10 69.3 129 35.7
Os06g0627500 Oryza sativa ssp. japonica HOM05D006470 ORTHO05D007978 7.6e-08 61.6 136 33.1
SEGI_14529 Sequoiadendron giganteum HOM05D004034 ORTHO05D004210 1.7e-07 60.5 156 28.8
ATR0681G334 Amborella trichopoda HOM05D006470 ORTHO05D007978 3.7e-07 59.3 136 30.1


User provided reference genes

Program Settings