Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g069665 Medicago truncatula HOM05D006470 ORTHO05D007978 2.0e-109 399.1 189 100.0
Medtr1g069680 Medicago truncatula HOM05D006470 ORTHO05D007978 4.4e-69 265.0 185 70.3
Psat6g063200 Pisum sativum HOM05D006470 ORTHO05D007978 4.2e-35 152.1 171 49.7
Medtr1g069695 Medicago truncatula HOM05D006470 ORTHO05D007978 1.2e-34 150.6 181 48.1
Psat6g062280 Pisum sativum HOM05D006470 ORTHO05D007978 2.3e-33 146.4 189 47.1
Ca_09663_v3 Cicer arietinum L. HOM05D006470 ORTHO05D007978 5.6e-32 141.7 183 44.3
Psat6g062240 Pisum sativum HOM05D006470 ORTHO05D007978 1.3e-31 140.6 192 43.2
Lj5g0015356 Lotus japonicus HOM05D006470 ORTHO05D007978 7.6e-29 131.3 171 42.1
Lalb_Chr25g0289891 Lupinus albus HOM05D006470 ORTHO05D007978 3.8e-28 129.0 180 41.7
VMungo0720G2572 Vigna mungo HOM05D006470 ORTHO05D007978 3.5e-26 122.5 181 42.5
Phvul.007G191000 Phaseolus vulgaris HOM05D006470 ORTHO05D007978 5.1e-25 118.6 180 41.7
Glyma.10G038800 Glycine max HOM05D006470 ORTHO05D007978 1.5e-24 117.1 187 39.6
FAN15G1173 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.8e-22 110.2 183 36.1
FAN27G1109 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.8e-22 110.2 183 36.1
FAN24G3268 Fragaria x ananassa HOM05D006470 ORTHO05D007978 2.4e-22 109.8 180 36.1
Glyma.13G125201 Glycine max HOM05D006470 ORTHO05D007978 2.4e-22 109.8 146 46.6
Nitab4.5_0003295g0060 Nicotiana tabacum HOM05D006470 ORTHO05D007978 4.0e-22 109.0 181 35.4
FvH4_2g21070 Fragaria vesca HOM05D006470 ORTHO05D007978 5.3e-22 108.6 180 36.1
Ciclev10020031m.g Citrus clementina HOM05D006470 ORTHO05D007978 6.9e-22 108.2 164 39.6
arahy.Tifrunner.gnm1.ann1.NTND9X Arachis hypogaea HOM05D006470 ORTHO05D007978 9.0e-22 107.8 159 45.9
A01p09340 Brassica napus HOM05D006470 ORTHO05D007978 9.0e-22 107.8 168 40.5
BraA01t00881Z Brassica rapa HOM05D006470 ORTHO05D007978 9.0e-22 107.8 168 40.5
RcHm_v2.0_Chr6g0287531 Rosa chinensis HOM05D006470 ORTHO05D007978 9.0e-22 107.8 183 37.7
Thecc.01G254400 Theobroma cacao HOM05D006470 ORTHO05D007978 9.0e-22 107.8 162 37.7
Cc01_g18070 Coffea canephora HOM05D006470 ORTHO05D007978 1.5e-21 107.1 174 36.8
Nitab4.5_0001945g0030 Nicotiana tabacum HOM05D006470 ORTHO05D007978 2.0e-21 106.7 179 34.6
COL.COLO4_04011 Corchorus olitorius HOM05D006470 ORTHO05D007978 2.6e-21 106.3 155 41.3
QL09p040137 Quercus lobata HOM05D006470 ORTHO05D007978 3.4e-21 105.9 147 43.5
C01p10920 Brassica napus HOM05D006470 ORTHO05D007978 5.8e-21 105.1 164 39.6
MD10G1180100 Malus domestica HOM05D006470 ORTHO05D007978 5.8e-21 105.1 134 43.3
Haze_24664 Corylus avellana HOM05D006470 ORTHO05D007978 1.3e-20 104.0 179 36.3
FAN20G2495 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.7e-20 103.6 185 34.6
TWI18G0736 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 1.7e-20 103.6 150 41.3
Manes.13G036500 Manihot esculenta HOM05D006470 ORTHO05D007978 2.9e-20 102.8 178 37.6
BcaNung04289 Brassica carinata HOM05D006470 ORTHO05D007978 3.8e-20 102.4 164 39.6
BcaNung04688 Brassica carinata HOM05D006470 ORTHO05D007978 3.8e-20 102.4 164 39.6
BcaNung04689 Brassica carinata HOM05D006470 ORTHO05D007978 3.8e-20 102.4 164 39.6
Prupe.8G220100 Prunus persica HOM05D006470 ORTHO05D007978 4.9e-20 102.1 176 36.4
Cfa002452 Carpinus fangiana HOM05D006470 ORTHO05D007978 8.4e-20 101.3 157 39.5
Dinv22382 Davidia involucrata HOM05D006470 ORTHO05D007978 1.1e-19 100.9 175 37.7
BcaC09g51655 Brassica carinata HOM05D006470 ORTHO05D007978 1.4e-19 100.5 136 43.4
BolC1t01056H Brassica oleracea HOM05D006470 ORTHO05D007978 1.4e-19 100.5 136 43.4
CiPaw.03G267400 Carya illinoinensis HOM05D006470 ORTHO05D007978 1.9e-19 100.1 156 39.1
Duzib133G1499 Durio zibethinus HOM05D006470 ORTHO05D007978 1.9e-19 100.1 175 36.0
Duzib138G0951 Durio zibethinus HOM05D006470 ORTHO05D007978 1.9e-19 100.1 140 41.4
THA.LOC104814525 Tarenaya hassleriana HOM05D006470 ORTHO05D007978 1.9e-19 100.1 184 35.9
AL7G23980 Arabidopsis lyrata HOM05D006470 ORTHO05D007978 2.5e-19 99.8 157 37.6
Lj2P1147T22 Lonicera japonica HOM05D006470 ORTHO05D007978 2.5e-19 99.8 178 34.8
Migut.D00451 Erythranthe guttata HOM05D006470 ORTHO05D007978 3.2e-19 99.4 196 32.7
Gohir.D07G156600 Gossypium hirsutum HOM05D006470 ORTHO05D007978 3.2e-19 99.4 131 41.2
Gorai.001G179700 Gossypium raimondii HOM05D006470 ORTHO05D007978 3.2e-19 99.4 131 41.2
AT4G28560 Arabidopsis thaliana HOM05D006470 ORTHO05D007978 4.2e-19 99.0 159 37.1
CARHR236350 Cardamine hirsuta HOM05D006470 ORTHO05D007978 5.5e-19 98.6 160 35.6
HanXRQChr10g0280761 Helianthus annuus HOM05D006470 ORTHO05D007978 5.5e-19 98.6 182 34.6
Manes.12G034500 Manihot esculenta HOM05D006470 ORTHO05D007978 7.1e-19 98.2 176 36.9
CAN.G1251.2 Capsicum annuum HOM05D006470 ORTHO05D007978 9.3e-19 97.8 153 37.3
CAN.G1868.1 Capsicum annuum HOM05D006470 ORTHO05D007978 9.3e-19 97.8 153 37.3
PGSC0003DMG400010325 Solanum tuberosum HOM05D006470 ORTHO05D007978 9.3e-19 97.8 151 37.1
Aa31LG2G21810 Aethionema arabicum HOM05D006470 ORTHO05D007978 1.2e-18 97.4 192 35.4
Cpa.g.sc165.30 Carica papaya HOM05D006470 ORTHO05D007978 1.2e-18 97.4 177 36.7
SalBow4G0507 Salvia bowleyana HOM05D006470 ORTHO05D007978 1.2e-18 97.4 156 35.3
Carub.0007s1211 Capsella rubella HOM05D006470 ORTHO05D007978 1.6e-18 97.1 159 37.7
Sp7g26550 Schrenkiella parvula HOM05D006470 ORTHO05D007978 1.6e-18 97.1 163 39.3
SGA_v2.0_scaffold1G00631 Striga asiatica HOM05D006470 ORTHO05D007978 2.1e-18 96.7 161 40.4
CSS0011402 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 2.7e-18 96.3 181 35.9
CSS0034739 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 2.7e-18 96.3 181 35.9
Lsat_1_v5_gn_9_10681 Lactuca sativa HOM05D006470 ORTHO05D007978 2.7e-18 96.3 160 35.0
SHI26693 Sapria himalayana HOM05D006470 ORTHO05D007978 2.7e-18 96.3 175 37.7
TWI12G0101 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 2.7e-18 96.3 151 37.7
Actinidia37529 Actinidia chinensis HOM05D006470 ORTHO05D007978 3.5e-18 95.9 178 35.4
Hma1.2p1_0576F.1_g181850 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 3.5e-18 95.9 186 34.9
Lsat_1_v5_gn_5_182700 Lactuca sativa HOM05D006470 ORTHO05D007978 3.5e-18 95.9 183 33.3
Gohir.A07G150300 Gossypium hirsutum HOM05D006470 ORTHO05D007978 6.0e-18 95.1 153 36.6
Thhalv10027034m.g Eutrema salsugineum HOM05D006470 ORTHO05D007978 7.9e-18 94.7 156 37.2
Sed0015172 Sechium edule HOM05D006470 ORTHO05D007978 1.0e-17 94.4 143 37.8
Sabra05G0175600 Salix brachista HOM05D006470 ORTHO05D007978 1.3e-17 94.0 175 34.3
Solyc09g072630.3 Solanum lycopersicum HOM05D006470 ORTHO05D007978 1.3e-17 94.0 179 33.0
Sopen09g028440 Solanum pennellii HOM05D006470 ORTHO05D007978 1.3e-17 94.0 178 32.0
Potri.005G227600 Populus trichocarpa HOM05D006470 ORTHO05D007978 2.3e-17 93.2 191 32.5
Peaxi162Scf00415g00003 Petunia axillaris HOM05D006470 ORTHO05D007978 3.0e-17 92.8 151 35.8
Sed0003902 Sechium edule HOM05D006470 ORTHO05D007978 5.1e-17 92.0 159 37.1
Rhsim13G0037300 Rhododendron simsii HOM05D006470 ORTHO05D007978 1.5e-16 90.5 168 34.5
DCAR_012563 Daucus carota HOM05D006470 ORTHO05D007978 1.9e-16 90.1 160 36.2
PSO210G2696 Papaver somniferum HOM05D006470 ORTHO05D007978 1.9e-16 90.1 159 36.5
vmacro02686 Vaccinium macrocarpon HOM05D006470 ORTHO05D007978 5.6e-16 88.6 176 34.7
AUR62025485 Chenopodium quinoa HOM05D006470 ORTHO05D007978 1.3e-15 87.4 134 38.1
ClCG00G001450 Citrullus lanatus HOM05D006470 ORTHO05D007978 4.8e-15 85.5 167 34.1
ClCG07G001200 Citrullus lanatus HOM05D006470 ORTHO05D007978 4.8e-15 85.5 167 34.1
HPP92_012855 Vanilla planifolia HOM05D006470 ORTHO05D007978 4.8e-15 85.5 128 41.4
CDE02G3387 Ceratophyllum demersum HOM05D006470 ORTHO05D007978 1.1e-14 84.3 161 31.7
PSO832G0066 Papaver somniferum HOM05D006470 ORTHO05D007978 3.1e-14 82.8 154 35.7
TAR362G1291 Trochodendron aralioides HOM05D006470 ORTHO05D007978 3.1e-14 82.8 178 32.6
CsaV3_3G022070 Cucumis sativus L. HOM05D006470 ORTHO05D007978 5.3e-14 82.0 169 33.7
ECA248G1135 Erigeron canadensis HOM05D006470 ORTHO05D007978 5.3e-14 82.0 168 33.3
Aqoxy5G00193 Aquilegia oxysepala HOM05D006470 ORTHO05D007978 2.6e-13 79.7 157 35.0
MELO3C012860.2 Cucumis melo HOM05D006470 ORTHO05D007978 4.5e-13 79.0 167 31.7
Sc05g0003180 Simmondsia chinensis HOM05D006470 ORTHO05D007978 4.6e-10 68.9 129 35.7
ATR0736G105 Amborella trichopoda HOM05D006470 ORTHO05D007978 6.1e-10 68.6 162 30.9
unitig_0.g163 Utricularia gibba HOM05D006470 ORTHO05D007978 1.8e-09 67.0 124 34.7
Os06g0627500 Oryza sativa ssp. japonica HOM05D006470 ORTHO05D007978 5.1e-09 65.5 159 31.4
ATR0681G334 Amborella trichopoda HOM05D006470 ORTHO05D007978 2.5e-08 63.2 136 31.6
Oeu052037.1 Olea europaea HOM05D006470 ORTHO05D007978 4.3e-08 62.4 132 35.6
SMO358G0434 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 4.3e-08 62.4 132 32.6
Atru.BG.79.p Acer truncatum HOM05D006470 ORTHO05D007978 1.3e-07 60.8 100 40.0
Medtr1g069675 Medicago truncatula HOM05D006470 ORTHO05D007978 1.8e-06 57.0 76 42.1
Hma1.2p1_0273F.1_g109440 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 9.0e-06 54.7 75 40.0


User provided reference genes

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