Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g069160 Medicago truncatula HOM05D000002 ORTHO05D259141 1.0e-78 296.6 139 100.0
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 2.4e-11 72.8 98 41.8
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-11 72.0 98 41.8
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 6.9e-11 71.2 98 41.8
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-10 67.8 99 38.4
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-10 67.8 99 38.4
CSS0015647 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-09 66.2 99 36.4
CSS0027984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-09 66.2 99 36.4
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-09 65.9 100 36.0
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-09 64.7 99 37.4
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-08 63.9 99 35.4
CSS0047919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-08 63.5 99 34.3
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.2e-08 62.0 99 38.4
ECA248G1506 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-08 61.2 103 31.1
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.9e-07 57.8 106 34.0
Hma1.2p1_0774F.1_g216290 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-06 57.0 99 36.4
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 86 38.4
Nn7g37205 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.6e-06 54.7 98 32.7
CSS0042948 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 100 33.0


User provided reference genes

Program Settings