Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 1.3e-26 123.2 86 100.0
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 2.3e-15 85.9 59 72.9
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 8.3e-13 77.4 59 69.5
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 9.1e-12 73.9 61 62.3
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 1.2e-11 73.6 57 63.2
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.6e-11 73.2 59 62.7
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 4.5e-11 71.6 62 61.3
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 1.7e-10 69.7 61 62.3
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 1.7e-10 69.7 60 65.0
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 2.3e-10 69.3 61 67.2
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 5.0e-10 68.2 60 61.7
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 6.6e-10 67.8 62 61.3
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 6.6e-10 67.8 60 63.3
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 8.6e-10 67.4 56 62.5
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.5e-09 66.6 56 62.5
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 2.5e-09 65.9 61 60.7
Psat6g065640 Pisum sativum HOM05D007427 ORTHO05D006413 2.5e-09 65.9 56 66.1
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 5.5e-09 64.7 59 69.5
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 5.5e-09 64.7 55 61.8
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 7.2e-09 64.3 61 57.4
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 7.2e-09 64.3 58 56.9
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 7.2e-09 64.3 75 50.7
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.2e-08 63.5 58 62.1
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 1.2e-08 63.5 60 60.0
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.6e-08 63.2 74 52.7
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 2.1e-08 62.8 56 55.4
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 2.1e-08 62.8 61 57.4
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 2.8e-08 62.4 58 63.8
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 4.7e-08 61.6 59 55.9
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 4.7e-08 61.6 63 57.1
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 8.0e-08 60.8 61 55.7
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 8.0e-08 60.8 58 58.6
Lalb_Chr02g0152981 Lupinus albus HOM05D007427 ORTHO05D006413 8.0e-08 60.8 61 60.7
AT4G29030 Arabidopsis thaliana HOM05D008344 ORTHO05D006413 1.0e-07 60.5 59 55.9
A03p58660 Brassica napus HOM05D008344 ORTHO05D006413 1.0e-07 60.5 61 57.4
BraA03t14927Z Brassica rapa HOM05D008344 ORTHO05D006413 1.0e-07 60.5 61 57.4
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 1.4e-07 60.1 67 49.3
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 2.3e-07 59.3 60 56.7
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 2.3e-07 59.3 63 52.4
Psat0s1775g0360 Pisum sativum HOM05D007427 ORTHO05D320804 2.3e-07 59.3 60 53.3
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.0e-07 58.9 61 52.5
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 3.0e-07 58.9 62 59.7
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 3.0e-07 58.9 62 59.7
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 4.0e-07 58.5 62 58.1
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 4.0e-07 58.5 62 58.1
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 5.2e-07 58.2 72 45.8
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 6.8e-07 57.8 59 55.9
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 6.8e-07 57.8 61 50.8
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 6.8e-07 57.8 51 66.7
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 6.8e-07 57.8 55 58.2
Thhalv10026613m.g Eutrema salsugineum HOM05D008344 ORTHO05D006413 8.9e-07 57.4 61 57.4
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.9e-07 57.4 59 54.2
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.9e-07 57.4 72 45.8
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 1.2e-06 57.0 61 55.7
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 1.2e-06 57.0 61 55.7
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 1.2e-06 57.0 61 55.7
BcaC09g51682 Brassica carinata HOM05D008344 ORTHO05D006413 1.5e-06 56.6 59 55.9
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.5e-06 56.6 60 55.0
C07p56610 Brassica napus HOM05D008344 ORTHO05D006413 2.0e-06 56.2 58 55.2
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 2.0e-06 56.2 60 55.0
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.0e-06 56.2 62 53.2
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.0e-06 56.2 62 53.2
BolC1t01011H Brassica oleracea HOM05D008344 ORTHO05D006413 2.6e-06 55.8 61 54.1
Sp7g26970 Schrenkiella parvula HOM05D008344 ORTHO05D006413 2.6e-06 55.8 61 55.7
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 3.4e-06 55.5 81 42.0
PGSC0003DMG400015810 Solanum tuberosum HOM05D014142 ORTHO05D006413 5.7e-06 54.7 53 54.7
BcaB03g12592 Brassica carinata HOM05D008344 ORTHO05D006413 7.5e-06 54.3 61 55.7
Gohir.D08G211500 Gossypium hirsutum HOM05D007427 ORTHO05D006413 7.5e-06 54.3 76 48.7
Gorai.004G224800 Gossypium raimondii HOM05D007427 ORTHO05D006413 7.5e-06 54.3 76 48.7
Gohir.A08G193800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 9.8e-06 53.9 76 48.7
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 9.8e-06 53.9 55 54.5
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 9.8e-06 53.9 61 52.5


User provided reference genes

Program Settings