Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 6.0e-68 260.8 137 100.0
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.5e-55 219.5 131 87.0
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 3.5e-52 208.4 125 87.2
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 4.5e-47 191.4 123 79.7
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.8e-46 188.3 145 71.7
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.8e-46 188.3 145 71.7
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 1.8e-43 179.5 129 72.1
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.5e-39 166.4 123 68.3
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 7.7e-39 164.1 109 78.0
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 9.4e-37 157.1 111 71.2
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 2.7e-36 155.6 114 68.4
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.4e-32 143.3 110 67.3
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.5e-31 139.8 127 55.1
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 3.5e-31 138.7 129 54.3
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 3.5e-31 138.7 127 55.1
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 4.5e-31 138.3 125 55.2
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 1.7e-30 136.3 127 55.9
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.7e-30 136.3 126 54.8
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.7e-30 136.3 126 54.8
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.9e-30 135.6 126 55.6
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.1e-29 133.7 124 54.8
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 3.0e-27 125.6 113 57.5
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.1e-26 123.6 126 50.8
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 1.5e-26 123.2 125 52.0
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 4.4e-26 121.7 129 48.8
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 1.7e-25 119.8 124 54.8
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.1e-24 117.1 133 48.1
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 1.4e-24 116.7 106 54.7
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.8e-24 116.3 108 54.6
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.4e-24 115.9 108 54.6
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 4.1e-24 115.2 108 53.7
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 9.1e-24 114.0 114 55.3
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 5.9e-23 111.3 108 52.8
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 5.9e-23 111.3 107 52.3
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.7e-22 109.8 106 52.8
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 1.7e-22 109.8 117 48.7
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.9e-22 109.0 128 46.1
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.9e-22 109.0 106 52.8
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 5.0e-22 108.2 108 52.8
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 5.0e-22 108.2 113 52.2
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 6.5e-22 107.8 108 51.9
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 6.5e-22 107.8 112 49.1
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 8.5e-22 107.5 107 50.5
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 1.9e-21 106.3 126 46.8
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.5e-21 105.9 105 50.5
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 3.2e-21 105.5 108 43.5
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 4.2e-21 105.1 108 43.5
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 5.5e-21 104.8 126 50.0
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 5.5e-21 104.8 126 50.0
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 7.2e-21 104.4 131 44.3
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 9.4e-21 104.0 93 53.8
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.6e-20 103.2 109 46.8
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.1e-20 102.8 104 50.0
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 3.6e-20 102.1 110 44.5
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.0e-19 100.5 129 44.2
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 1.4e-19 100.1 109 47.7
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.3e-19 99.4 102 49.0
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 4.0e-19 98.6 108 46.3
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 8.8e-19 97.4 115 47.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 1.5e-18 96.7 119 39.5
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 4.4e-18 95.1 103 47.6
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 7.5e-18 94.4 119 43.7
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 9.7e-18 94.0 99 47.5
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.7e-17 93.2 110 42.7
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 2.8e-17 92.4 108 47.2
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 3.7e-17 92.0 102 43.1
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.4e-16 90.1 117 44.4
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.4e-16 90.1 101 43.6
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 1.4e-16 90.1 102 42.2
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 2.4e-16 89.4 110 43.6
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 2.4e-16 89.4 113 42.5
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 3.1e-16 89.0 108 46.3
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 7.0e-16 87.8 77 54.5
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 7.0e-16 87.8 97 44.3
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 9.1e-16 87.4 99 50.5
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 2.7e-15 85.9 129 36.4
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 2.7e-15 85.9 100 42.0
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 4.5e-15 85.1 107 42.1
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 7.7e-15 84.3 104 42.3
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.0e-14 84.0 144 36.8
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.3e-14 83.6 107 43.0
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.7e-14 83.2 105 44.8
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.7e-14 83.2 84 51.2
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 2.9e-14 82.4 108 38.0
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 1.5e-13 80.1 113 36.3
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.4e-11 73.6 99 43.4
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.4e-11 73.6 76 46.1
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 2.3e-11 72.8 109 35.8
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 3.0e-11 72.4 103 37.9
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 5.2e-11 71.6 63 55.6
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 6.8e-11 71.2 52 61.5
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.5e-10 70.1 93 40.9
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 2.6e-10 69.3 130 36.2
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 3.7e-09 65.5 68 54.4
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 7.0e-08 61.2 97 33.0
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.2e-07 60.5 103 36.9
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.2e-07 60.5 56 50.0
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 1.3e-06 57.0 89 38.2


User provided reference genes

Program Settings