Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.1e-95 353.2 172 100.0
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 6.6e-72 274.2 142 94.4
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 5.8e-68 261.2 170 76.5
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.3e-67 260.0 169 75.1
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 5.4e-66 254.6 168 72.0
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.6e-65 253.1 168 72.6
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 5.6e-63 244.6 170 69.4
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 3.6e-62 241.9 120 90.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 3.5e-57 225.3 154 64.9
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.3e-55 218.4 155 64.5
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.1e-53 213.8 169 59.2
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.8e-53 213.0 155 62.6
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 2.4e-53 212.6 142 66.2
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.1e-53 212.2 153 62.7
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 5.3e-53 211.5 156 62.8
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 9.0e-53 210.7 147 62.6
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 9.0e-53 210.7 150 60.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 9.0e-53 210.7 156 63.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 2.0e-52 209.5 157 60.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 2.6e-52 209.1 139 65.5
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 2.6e-52 209.1 130 66.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 3.4e-52 208.8 155 63.2
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.5e-52 208.4 154 59.7
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 5.8e-52 208.0 156 61.5
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 7.6e-52 207.6 167 58.7
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 9.9e-52 207.2 165 58.8
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.3e-51 206.8 153 59.5
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.3e-51 206.8 139 60.4
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.7e-51 206.5 168 59.5
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.7e-51 206.5 155 61.3
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 2.2e-51 206.1 132 65.2
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 6.4e-51 204.5 153 60.8
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 1.1e-50 203.8 167 59.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.4e-50 203.4 169 58.0
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.9e-50 203.0 155 59.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.4e-50 202.6 166 58.4
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 3.2e-50 202.2 165 57.0
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 3.2e-50 202.2 128 65.6
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 9.3e-50 200.7 162 58.6
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 9.3e-50 200.7 164 59.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 9.3e-50 200.7 138 62.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.2e-49 200.3 128 67.2
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.2e-49 200.3 155 60.0
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.2e-49 200.3 139 61.2
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.2e-49 200.3 169 56.8
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.1e-49 199.5 153 59.5
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 2.7e-49 199.1 137 62.0
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 2.7e-49 199.1 170 51.8
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 3.5e-49 198.7 156 60.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 4.6e-49 198.4 167 55.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 4.6e-49 198.4 124 66.1
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 4.6e-49 198.4 163 55.2
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 6.0e-49 198.0 170 55.9
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 6.0e-49 198.0 169 55.6
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.0e-49 198.0 132 61.4
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 6.0e-49 198.0 153 56.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 6.0e-49 198.0 165 55.2
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 7.9e-49 197.6 169 56.2
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.0e-48 197.2 171 56.1
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.0e-48 197.2 167 57.5
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.0e-48 197.2 167 57.5
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.3e-48 196.8 172 54.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.8e-48 196.4 168 55.4
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.8e-48 196.4 169 55.0
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.8e-48 196.4 163 55.2
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.3e-48 196.1 132 63.6
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 3.0e-48 195.7 158 54.4
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 5.1e-48 194.9 152 57.2
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.1e-47 193.7 167 53.9
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.5e-47 193.4 150 57.3
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.9e-47 193.0 163 54.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 4.3e-47 191.8 178 56.2
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 2.1e-46 189.5 172 54.7
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.8e-46 188.3 166 53.6
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 8.1e-46 187.6 168 54.8
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 4.0e-45 185.3 165 53.3
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 4.9e-43 178.3 160 52.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 6.4e-43 177.9 134 58.2
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 7.1e-42 174.5 135 57.8
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.2e-41 173.7 107 65.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.1e-41 172.9 121 60.3
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.9e-39 166.4 139 55.4
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.3e-39 165.6 149 50.3
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.1e-38 162.9 125 58.4
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 3.7e-38 162.2 115 53.9
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.1e-37 160.6 125 52.8
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 6.5e-35 151.4 154 48.7
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 8.4e-35 151.0 87 74.7
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.2e-34 149.1 161 47.8
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.6e-33 146.7 150 48.0
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 4.6e-33 145.2 168 45.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.0e-32 142.5 150 47.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 8.7e-32 141.0 161 46.6
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.5e-28 130.2 86 60.5
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.7e-27 126.7 182 40.7
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.6e-25 120.2 89 56.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 3.0e-16 89.4 65 67.7
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.0e-15 86.7 56 66.1
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 3.1e-13 79.3 74 51.4
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.6e-12 76.3 130 33.1
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.8e-11 72.4 77 50.6


User provided reference genes

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