Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g066980 Medicago truncatula HOM05D000002 ORTHO05D010765 7.5e-65 250.4 127 100.0
Sopen12g020130 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-11 71.6 51 74.5
CSS0025606 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 92 45.7
CSS0038035 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 92 45.7
CiPaw.11G068500 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 49 67.3
CSS0005552 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-09 64.7 92 44.6
GSVIVG01009548001 Vitis vinifera HOM05D000369 ORTHO05D000253 1.7e-08 63.2 93 44.1
CSS0001524 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.6 69 50.7
CSS0024907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.6 69 50.7
CSS0031738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.6 69 50.7
Lalb_Chr00c03g0404321 Lupinus albus HOM05D000002 ORTHO05D000001 5.0e-08 61.6 54 55.6
PGR102G2121 Punica granatum HOM05D000002 ORTHO05D000001 5.0e-08 61.6 51 64.7
Ah.04g154410 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.5e-08 61.2 92 41.3
SEGI_29975 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.5e-08 61.2 90 42.2
CSS0008359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-08 60.8 66 53.0
CSS0021259 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-08 60.8 95 36.8
CSS0047281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-08 60.8 54 53.7
Thecc.01G177400 Theobroma cacao HOM05D000002 ORTHO05D000001 8.5e-08 60.8 52 65.4
CSS0003722 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0006961 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0012466 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0014302 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0024348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0028743 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0033853 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0039189 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0043278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0044470 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0044482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
CSS0047410 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 66 51.5
AL3G41360 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 1.9e-07 59.7 61 55.7
CSS0036372 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.7 54 53.7
CSS0047847 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-07 59.3 66 51.5
RcHm_v2.0_Chr2g0159601 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-07 58.9 95 37.9
CSS0039499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.5 66 50.0
TPR.G20757 Trifolium pratense HOM05D000002 ORTHO05D000001 4.2e-07 58.5 54 55.6
Sopen01g014280 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-07 58.2 51 62.7
TPR.G8661 Trifolium pratense HOM05D000002 ORTHO05D000001 5.5e-07 58.2 54 55.6
CSS0007922 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 57.8 66 50.0
CSS0026866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-07 57.8 54 51.9
CSS0036915 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.2e-07 57.8 95 34.7
Sopen03g026940 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 57.8 93 39.8
CSS0022318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-07 57.4 54 51.9
CSS0032272 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-07 57.4 54 51.9
Gohir.D13G052366 Gossypium hirsutum HOM05D000002 ORTHO05D010765 9.4e-07 57.4 47 66.0
Thecc.04G110300 Theobroma cacao HOM05D000002 ORTHO05D010765 9.4e-07 57.4 51 62.7
RhsimUnG0147800 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-06 57.0 54 50.0
TAR134G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-06 57.0 66 43.9
Ah.16g102970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.6e-06 56.6 65 41.5
CSS0013895 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 56.2 95 34.7
CSS0044191 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 56.2 49 59.2
CSS0035846 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-06 55.8 51 54.9
CSS0028687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 55.5 54 50.0
CSS0035904 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 55.5 51 52.9
CSS0012125 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-06 54.7 48 58.3
MD04G1043200 Malus domestica HOM05D000002 ORTHO05D000001 6.1e-06 54.7 65 47.7
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 6.1e-06 54.7 48 56.2
AUR62029288 Chenopodium quinoa HOM05D000002 ORTHO05D000001 7.9e-06 54.3 39 69.2


User provided reference genes

Program Settings