Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 3.3e-127 458.4 227 100.0
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 6.2e-102 374.4 226 78.8
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 2.4e-98 362.5 223 80.3
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 9.3e-90 334.0 221 74.7
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 1.3e-88 330.1 220 74.1
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 2.3e-88 329.3 217 72.4
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 2.3e-88 329.3 216 73.1
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 5.1e-88 328.2 222 73.0
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 1.3e-86 323.6 222 72.5
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 3.6e-86 322.0 213 74.6
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 6.2e-86 321.2 218 72.0
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.8e-85 319.7 220 71.4
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 4.0e-85 318.5 213 73.7
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 5.3e-85 318.2 219 71.7
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 6.9e-85 317.8 213 72.3
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 9.0e-85 317.4 217 70.5
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 9.0e-85 317.4 219 71.2
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 9.0e-85 317.4 219 71.2
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 1.2e-84 317.0 225 69.8
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 1.5e-84 316.6 225 70.7
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 1.5e-84 316.6 210 74.3
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 2.6e-84 315.8 211 71.6
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 3.4e-84 315.5 225 70.2
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 3.4e-84 315.5 220 70.9
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 3.4e-84 315.5 215 72.1
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 4.5e-84 315.1 220 71.4
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 4.5e-84 315.1 224 71.0
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 4.5e-84 315.1 215 72.6
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 1.3e-83 313.5 218 72.0
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 1.7e-83 313.2 220 72.3
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 2.2e-83 312.8 211 71.1
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 2.9e-83 312.4 210 72.4
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 4.9e-83 311.6 221 70.6
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 6.4e-83 311.2 226 66.8
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 1.4e-82 310.1 217 69.6
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 1.9e-82 309.7 221 69.2
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 2.4e-82 309.3 225 67.6
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 2.4e-82 309.3 211 73.0
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 7.1e-82 307.8 225 67.6
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 9.3e-82 307.4 224 72.3
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 9.3e-82 307.4 225 67.1
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 1.6e-81 306.6 215 71.2
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 2.7e-81 305.8 223 68.6
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 3.5e-81 305.4 228 70.6
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 4.6e-81 305.1 220 68.2
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 7.9e-81 304.3 225 67.1
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 7.9e-81 304.3 220 70.5
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 1.0e-80 303.9 224 67.4
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 1.3e-80 303.5 218 68.3
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 1.3e-80 303.5 212 70.8
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 1.3e-80 303.5 212 70.8
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 1.3e-80 303.5 212 70.8
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 1.3e-80 303.5 212 70.8
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 1.3e-80 303.5 212 70.8
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 6.7e-80 301.2 216 69.0
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 6.7e-80 301.2 225 68.0
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 8.7e-80 300.8 222 68.5
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 1.9e-79 299.7 220 66.8
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 2.5e-79 299.3 220 66.8
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 3.3e-79 298.9 220 66.8
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 3.3e-79 298.9 220 66.8
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 3.3e-79 298.9 220 67.7
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 4.3e-79 298.5 226 66.8
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 4.3e-79 298.5 216 69.0
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 9.6e-79 297.4 216 68.5
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 3.1e-77 292.4 219 65.8
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 3.1e-77 292.4 221 67.0
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 1.2e-76 290.4 210 68.1
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 2.6e-76 289.3 221 66.1
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 1.7e-75 286.6 220 65.0
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 2.2e-75 286.2 216 67.1
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 3.8e-75 285.4 219 64.4
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 3.8e-75 285.4 219 62.6
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 4.9e-75 285.0 222 65.8
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 6.5e-75 284.6 211 67.8
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 5.5e-74 281.6 218 66.1
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 5.5e-74 281.6 221 67.0
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 2.7e-73 279.3 214 66.8
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 4.6e-73 278.5 211 66.8
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 4.6e-73 278.5 211 66.8
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 6.0e-73 278.1 210 64.3
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 7.9e-73 277.7 226 63.7
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 1.0e-72 277.3 216 63.0
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 8.7e-72 274.2 220 65.5
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 2.5e-71 272.7 223 61.4
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 3.3e-71 272.3 223 61.9
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 3.3e-71 272.3 220 65.0
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 4.3e-71 271.9 215 62.8
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 7.4e-71 271.2 222 63.5
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 7.4e-71 271.2 211 64.9
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 1.6e-70 270.0 219 65.3
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 2.1e-70 269.6 222 63.5
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 2.8e-70 269.2 210 64.3
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 2.8e-70 269.2 225 62.7
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 4.8e-70 268.5 222 64.0
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 1.8e-69 266.5 220 64.1
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 4.1e-69 265.4 218 62.4
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 4.1e-69 265.4 215 63.3
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 5.3e-69 265.0 220 63.6
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 9.0e-69 264.2 220 61.4
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.2e-68 263.8 215 64.2
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 2.0e-68 263.1 212 62.7
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 2.0e-68 263.1 211 63.5
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 4.5e-68 261.9 225 60.4
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 4.5e-68 261.9 225 60.4
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 5.8e-68 261.5 225 60.0
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 5.8e-68 261.5 225 60.0
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 7.6e-68 261.2 211 60.2
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 5.0e-67 258.5 215 63.7
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 1.1e-66 257.3 218 57.3
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 5.5e-66 255.0 212 59.9
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 1.3e-64 250.4 218 60.1
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 3.0e-64 249.2 210 60.0
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 1.9e-63 246.5 184 65.2
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 1.8e-61 240.0 210 55.7
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 4.1e-61 238.8 136 80.9
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.5e-60 236.9 218 53.2
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.7e-59 233.4 223 52.5
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 2.5e-58 229.6 167 70.1
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 9.4e-58 227.6 212 57.5
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 1.2e-57 227.3 162 69.8
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 1.6e-57 226.9 163 69.9
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 1.0e-56 224.2 168 69.0
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 8.8e-56 221.1 218 53.7
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 9.1e-53 211.1 167 63.5
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.2e-51 206.5 178 62.4
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.2e-51 206.5 212 53.8
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 6.5e-51 204.9 169 60.9
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 4.2e-50 202.2 220 53.2
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 1.4e-48 197.2 208 52.9
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 2.8e-46 189.5 223 50.7
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 1.1e-45 187.6 136 67.6
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 3.1e-45 186.0 133 68.4
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 2.2e-43 179.9 130 69.2
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 1.4e-40 170.6 213 49.3
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 8.8e-32 141.4 91 71.4
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 6.3e-30 135.2 90 68.9
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 1.3e-27 127.5 96 65.6
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 1.2e-17 94.4 208 36.5
Cre06.g295250 Chlamydomonas reinhardtii HOM05D003144 ORTHO05D003539 1.7e-06 57.4 155 27.1
PRCOL_00003536 Prasinoderma coloniale HOM05D003144 ORTHO05D003539 3.7e-06 56.2 122 29.5


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